Gene Information

Name : Sked_25720 (Sked_25720)
Accession : YP_003315310.1
Strain : Sanguibacter keddieii DSM 10542
Genome accession: NC_013521
Putative virulence/resistance : Unknown
Product : cytidine deaminase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0295
EC number : -
Position : 2857654 - 2858064 bp
Length : 411 bp
Strand : -
Note : PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric

DNA sequence :
GTGAGCCAGACCATCGACTGGGACGGCCTGCGCACGGCTGCCCGCGACATCATGACCAAGGCGTACGCGCCCTACTCCGA
GTTCCCCGTCGGCGCAGCAGCGCTCGTCGACGACGGCCGCGTGGTCACCGGGTGCAACGTGGAGAACGCCGCCTACGGCG
TCGTGCTCTGCGCAGAGTGCGGCCTCGTGTCCTCGCTCGTCGCCTCGGGCGGCGGACGCCTGGTGGCCTTCACCTGCGTC
GACGGCCACGGGAACACCCTCATGCCGTGCGGCCGCTGCCGCCAGCTCCTGTGGGAGCACGGCGGGCCGTCGCTGCTCGT
CGAGACGACGCGCGGCATCGTCCCCATGAGCGAGGTGCTGCCCGACGCCTTCGGCCCGGACGACCTCGTCACCCGGGCTG
CCGACGCCTGA

Protein sequence :
MSQTIDWDGLRTAARDIMTKAYAPYSEFPVGAAALVDDGRVVTGCNVENAAYGVVLCAECGLVSSLVASGGGRLVAFTCV
DGHGNTLMPCGRCRQLLWEHGGPSLLVETTRGIVPMSEVLPDAFGPDDLVTRAADA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cdd YP_005163382.1 Cytidine deaminase Not tested Not named Protein 2e-10 41