Gene Information

Name : Sked_25360 (Sked_25360)
Accession : YP_003315274.1
Strain : Sanguibacter keddieii DSM 10542
Genome accession: NC_013521
Putative virulence/resistance : Unknown
Product : NADP-dependent oxidoreductase
Function : -
COG functional category : R : General function prediction only
COG ID : COG2130
EC number : -
Position : 2818071 - 2819090 bp
Length : 1020 bp
Strand : -
Note : PFAM: Zinc-binding dehydrogenase

DNA sequence :
ATGACGCAGCCCGCCACCAGCACCCAGATCCAGCTCGTCTCCCGGCCCACCGGCTGGCCGACGGCCGAGAACTTCCGCAC
CGTCACCGTCGAGCTCCCCGGGCTCGCGGCCGGCGAGGTCCGCATCGAGAACGAGTTCATGTCGGTCGACCCGTACATGC
GGGGCCGCATGAACGACGTGAAGTCCTACACGCCGCCCTTCGCGCTCGACGAGACCATGACCGGCGGGGCCGTCGGCCGG
GTCGTCGAGTCCACCTCGGACGACGTCCCCGTGGGCTCCGTCGTGGTGCACCAGCTCGGGTGGCGCGACGTCGCCCAGGG
TCCGGCCGCCGGGGTGCGCGTCGTCCCCGAGGTCGACGGCATCCCCAGCTCCGCCTACCTCAGCGTGCTCGGCATGACCG
CGCTCACCGCCTACGTCGGCCTCCTCGAGATCGCCCACCTGCGCGAGGGCGACACCGTGTTCGTCTCCGGCGCCGCCGGT
GCGGTCGGCAGCATGGTCGGCCAGATCGCCCGCCTCAAGGGCGCGGCGCGCGTCGTCGGGTCTGCCGGGTCGGCGGAGAA
GGTCGCCCTCCTCACCGAGCGCTACGGCTTCGACGCCGCCTTCAACTACAAGGACGGCGACGTCGCGGGGCAGCTCGCGC
AGGCCGCGCCCGACGGCATCGACGTGTACTTCGACAACGTCGGCGGGGAGCACCTCGAGGCCGCGCTCGGGGCCTTCAAC
GACCAGGGGCGCGCGGCGCTGTGCGGCGCGATCTCGCAGTACAACACCGAGGGCGAGGCGACCGGTCCGCGCAACATGGC
GAACATCGTCACCCGCGGTCTGACCCTCCAGGGCTTCACCGTCGGCGGCTACACGCAGCACTTCCCGTCCTTCATGGCGG
ACATGACCGCCTGGGTCACCGCAGGCGACGTCGTCTTCGACGAGACGGTCGTCGAGGGCCTCGACCACGCGGTCGACGCG
TTCCTCGGCATGATGCGCGGCGAGAACGTGGGCAAGATGGTCGTGAAGACCGCACGCTGA

Protein sequence :
MTQPATSTQIQLVSRPTGWPTAENFRTVTVELPGLAAGEVRIENEFMSVDPYMRGRMNDVKSYTPPFALDETMTGGAVGR
VVESTSDDVPVGSVVVHQLGWRDVAQGPAAGVRVVPEVDGIPSSAYLSVLGMTALTAYVGLLEIAHLREGDTVFVSGAAG
AVGSMVGQIARLKGAARVVGSAGSAEKVALLTERYGFDAAFNYKDGDVAGQLAQAAPDGIDVYFDNVGGEHLEAALGAFN
DQGRAALCGAISQYNTEGEATGPRNMANIVTRGLTLQGFTVGGYTQHFPSFMADMTAWVTAGDVVFDETVVEGLDHAVDA
FLGMMRGENVGKMVVKTAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0097 YP_252012.1 hypothetical protein Not tested SCCmec Protein 3e-58 45