Gene Information

Name : Sked_25270 (Sked_25270)
Accession : YP_003315265.1
Strain : Sanguibacter keddieii DSM 10542
Genome accession: NC_013521
Putative virulence/resistance : Resistance
Product : permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2809536 - 2810411 bp
Length : 876 bp
Strand : +
Note : PFAM: Integral membrane protein DUF6; TIGRFAM: Carboxylate/Amino Acid/Amine Transporter

DNA sequence :
GTGCTAAGCAAACGACAGGGGCTCCTCCTCACCACCGCCGTCGCTCCGGCAGTCTGGGCCACGACCTATCTCGTGACCTC
GGAGCTGCTCCCGCCCGGTCGCCCCTTCCTGGCCGGGGCGGTCCGCGCCCTGCCCGCCGGCCTGCTGCTGGTCGCGATCA
CCCGGCAGCTCCCGCACGGCGCGTGGTGGTGGCGCTCGCTCGTCCTGGGCGCCCTCAACATCGGCGGGTTCTTCGCGCTG
CTCTTCGTGGCCGCCTACCGCCTCCCGGGCGGCGTGGCCGCTGCGGTCGGCGCGCTCCAGCCGTTGTTCGTCGCCCTGCT
CGCGGTCGTCGTGCTGGGCCAGCGGCTCACAGCACGCACCCTGGTCGCGGGTGCCCTGGGTGTCGTCGGTGTCAGCCTCC
TCGTGCTGCGCGGCGAGACCGGGCTCGACACCGTCGGCGTGCTCGCCGCGGCCGGGGCCGCGGTCTCGATGTCCTGCGGC
GTGATCCTCGCCAAGCGGTGGGTATCCCCCGCGTCGCTCCTCGCGACCACGGGGTGGCAGCTCACCGCGGGAGGACTTCT
CCTCGTCGCACCCGCGCTCGCCCTCGAGGGCCTGCCCTCGCACGTCACGGGCCAGAACCTGGCCGGGTACGCGTACCTGA
CCCTCGTCGGCTCCGTCCTCGGCTACTCGCTGTGGTTCCGGGGACTGCGCGCGCTCCCGGCGACCGACGTGACGTTCCTC
GGGCTGCTCAACCCCGTCGTCGCGACCGCTCTCGGCTGGGCGGTGCTGGGTCAGACGCTCACCCCGCTCCAGCTGCTCGG
CGGTGTCGTCGTGCTCGTCTCGCTCGTCGTCGCACAGCGGCAGCGACCGCCACGTGCGGACGACCTCGCCCGTTGA

Protein sequence :
MLSKRQGLLLTTAVAPAVWATTYLVTSELLPPGRPFLAGAVRALPAGLLLVAITRQLPHGAWWWRSLVLGALNIGGFFAL
LFVAAYRLPGGVAAAVGALQPLFVALLAVVVLGQRLTARTLVAGALGVVGVSLLVLRGETGLDTVGVLAAAGAAVSMSCG
VILAKRWVSPASLLATTGWQLTAGGLLLVAPALALEGLPSHVTGQNLAGYAYLTLVGSVLGYSLWFRGLRALPATDVTFL
GLLNPVVATALGWAVLGQTLTPLQLLGGVVVLVSLVVAQRQRPPRADDLAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pecM ACN81012.1 PecM Not tested AbaR5 Protein 9e-26 50
pecM CAJ77067.1 Regulatory protein Not tested AbaR1 Protein 7e-26 50
pecM AGK07028.1 PecM Not tested SGI1 Protein 7e-26 50
pecM AGK07086.1 PecM Not tested SGI1 Protein 7e-26 50