Gene Information

Name : Sked_22460 (Sked_22460)
Accession : YP_003314995.1
Strain : Sanguibacter keddieii DSM 10542
Genome accession: NC_013521
Putative virulence/resistance : Unknown
Product : catalase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0753
EC number : 1.11.1.6
Position : 2499516 - 2501015 bp
Length : 1500 bp
Strand : +
Note : PFAM: Catalase-related immune-responsive; Catalase

DNA sequence :
ATGACCGACCGCTTCACGACCTCCCAGACCGGAACCCCGATCGCCAGCGACGAGCACTCGCTCACCGCCGGACCCGACGG
CGCAGCCGTCCTGCACGACCGCTACCTCGTCGAGAAGCTCGCGCAGTTCAACCGCGAGCGCATCCCGGAGCGCATCGTCC
ACGCCAAGGGTGGCGGCGCCTTCGGCACCTTCGAGGTGACCGGTGACGTCTCGGCGTACACCTCGGCAGCCGTCTTCCAG
CCCGGCACCGTCACCGAGACGCTGCAGCGCTTCTCGAGCGTGGCCGGCGAGCAGGGCAGCCCCGACACGTGGCGCGACGT
CCGCGGCTTCTCGGTGAAGTTCTACACCTCCGAGGGCAACTACGACATCGTCGGCAACAACACCCCGGTGTTCTTCATCC
GCGACGGCATCAAGTTCCCGGACTTCATCCACTCGCAGAAGCGCCTGCCGGGCTCCGGCCTGCGCGACGGCGACATGCAG
TGGGACTTCTGGACCCTCTCCCCCGAGTCCGCGCACCAGGTCACCTACCTCATGGGCGACCGCGGGCTCCCCCGCTCCTG
GCGCGAGATGCCCGGCTTCGGGTCGCACACGTACCAGTGGATCAACGCCGCGGGCGAGCGCTTCTGGGTCAAGTACCACT
TCACCTCGAACCAGGGGAACATCGAGATGGAGAGCGCCGAGGCCGAGCAGATCGCCGGCGCCGACGCCGACTACTACCGC
CGCGACCTCTACGAGGCCATCGAGGCCGGGAACCACCCGTCCTGGGACGTCCACGTCCAGGTGATGCCCTACGAGGACGC
CAAGACCTACCGGTTCAACCCCTTCGACCTGACGAAGGTCTGGCCGCACGCGGACTACCCGCTCATCAAGGTCGGGACGC
ACACGCTGAACCGGAACCCCGAGAACTTCTTCGCCGAGATCGAGCAGGCTGCGTTCTCCCCCGCGAACACCGTCCCCGGC
ATCGACATTAGCCCCGACAAGATGCTCATGGCTCGCGTGTTCTCCTACCCCGACGCCCAGCGGTACCGCGTCGGCACCAA
CTACAACCAGATCCCGGTGAACGCTCCCAAGGCACCGGTGCACAACTACTCGCAGGACGGGGCGCAGCGTCACGGCTTCA
AGGCGGCCTCCGACCCCGTCTACGCCCCGAACTCCTTCGGCGGACCGGTCGCCGACGCGTCCCGCGCGGCAGCCGGCTCG
TGGGAGAGCGACGGCGAGCTCGTCCGCACCGCGGCGACGCTGCACAGCGAGGACGACGACTTCGGCCAGGCCGGGACGCT
GTACCGCGAGGTCTTCGACGACGCCGCCAAGGCACGGTTCGTCGAGACCCTCGTCGGGCAGGGCTCGGGCATCACGGTGC
ACCGCGTCCGTGAGCGCTTCTTCGGGTACTGGACCAGCGTCGACGCCACCCTCGGCGCGACGCTCCGCGAGAAGGTCGGC
TCCATCGAGACGGCCAACGAGTCGGCCGAGCCGATCGGCATCGGCGCCGACCACGCCTGA

Protein sequence :
MTDRFTTSQTGTPIASDEHSLTAGPDGAAVLHDRYLVEKLAQFNRERIPERIVHAKGGGAFGTFEVTGDVSAYTSAAVFQ
PGTVTETLQRFSSVAGEQGSPDTWRDVRGFSVKFYTSEGNYDIVGNNTPVFFIRDGIKFPDFIHSQKRLPGSGLRDGDMQ
WDFWTLSPESAHQVTYLMGDRGLPRSWREMPGFGSHTYQWINAAGERFWVKYHFTSNQGNIEMESAEAEQIAGADADYYR
RDLYEAIEAGNHPSWDVHVQVMPYEDAKTYRFNPFDLTKVWPHADYPLIKVGTHTLNRNPENFFAEIEQAAFSPANTVPG
IDISPDKMLMARVFSYPDAQRYRVGTNYNQIPVNAPKAPVHNYSQDGAQRHGFKAASDPVYAPNSFGGPVADASRAAAGS
WESDGELVRTAATLHSEDDDFGQAGTLYREVFDDAAKARFVETLVGQGSGITVHRVRERFFGYWTSVDATLGATLREKVG
SIETANESAEPIGIGADHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA YP_005126717.1 catalase Not tested Not named Protein 3e-137 60
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 3e-133 58
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 3e-133 58
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 3e-133 58
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 3e-133 58
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 2e-102 47