Gene Information

Name : Sked_22040 (Sked_22040)
Accession : YP_003314957.1
Strain : Sanguibacter keddieii DSM 10542
Genome accession: NC_013521
Putative virulence/resistance : Unknown
Product : daunorubicin resistance ABC transporter ATP-binding subunit
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 2451840 - 2452877 bp
Length : 1038 bp
Strand : -
Note : PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit

DNA sequence :
ATGACCAGCTCCCCCTGGGCGATCGAGGCGCACGGCCTCGTCAAGACCTTCGGCAGCGCCCGTGCCGTCGACGGCGTCGA
CCTCCAGGTGCGCACCGGCACCGTGTACGGGGTGCTCGGCCCGAACGGCGCCGGCAAGACCACCGTGATCCGCATGCTCG
CCACCCTGCTGCGCCCCGACGGCGGCTCGGCGACGGTCTTCGGCCACGACGTGGCCACCGACCCGCACCGCGTGCGCCAG
CTCATCGGCGTCACCGGCCAGTACGCGTCCGTCGACGAGACGCTCAGCGCGACGGAGAACCTCGTGCTCTTCTCCCGGCT
GGCCGGGCTGAGCCGCGTGGCCTCACGGGCCAAGGCCGCCGAGCTGCTCGAGGAGTTCAGCCTCACCGAGGCCGCGGGCC
GTCCGCTCAAGCAGTTCTCCGGGGGGATGCGGCGTCGCCTCGACCTCGCGGCGAGCCTCATCTCACAGCCTCCGCTGATC
TTCCTCGACGAGCCGACCACCGGGCTCGACCCGCGGACCCGCACCCAGATGTGGGACACGCTGCGCCGCCTCGTCGCCTC
CGGGTCGACGGTGCTCCTCACCACCCAGTACCTCGACGAGGCCGACCAGCTCGCCGACCGCATCGCCGTGATCGACCGCG
GTCGCGTCGTGGCCGAGGGCACGAGCGAAGAGCTCAAGGCCTCCGTGGGGCAGCAGAGCCTCCAGGTGCGGGTCGCCGAC
CCGGACCGGCTCGACGTCGCGCGTCGCTGCGCGGTCGAGGTGTTCGGCGTCGAGCCGGCGACGAGCGGCGGCGACGGCCG
TCGGCTCACGGTGCCGGTCCTCGACCCCGCGTCCGTGACGGACCTGCTCCTGCGGCTCCGCGACGCGTCCGTCGAGGTGG
ACGAGATCTCCATGACGCGCCCGACGCTCGACGAGGTGTTCCTCACCCTCACCGGGCACGGTGCCCAGGGCGAGCCGGCC
GAGGCCCCCACGCCCCACGACGCGGCCCACCCGACCGTCGGCGCCCCCCGAGACTCCCGAGACGAGGTCCGAGCATGA

Protein sequence :
MTSSPWAIEAHGLVKTFGSARAVDGVDLQVRTGTVYGVLGPNGAGKTTVIRMLATLLRPDGGSATVFGHDVATDPHRVRQ
LIGVTGQYASVDETLSATENLVLFSRLAGLSRVASRAKAAELLEEFSLTEAAGRPLKQFSGGMRRRLDLAASLISQPPLI
FLDEPTTGLDPRTRTQMWDTLRRLVASGSTVLLTTQYLDEADQLADRIAVIDRGRVVAEGTSEELKASVGQQSLQVRVAD
PDRLDVARRCAVEVFGVEPATSGGDGRRLTVPVLDPASVTDLLLRLRDASVEVDEISMTRPTLDEVFLTLTGHGAQGEPA
EAPTPHDAAHPTVGAPRDSRDEVRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDC7B_2054 YP_005163495.1 methionine import ATP-binding protein Not tested Not named Protein 1e-58 48
CDCE8392_1976 YP_005134507.1 methionine import ATP-binding protein Not tested Not named Protein 1e-58 48