Gene Information

Name : Sked_20690 (Sked_20690)
Accession : YP_003314825.1
Strain : Sanguibacter keddieii DSM 10542
Genome accession: NC_013521
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 2305211 - 2306629 bp
Length : 1419 bp
Strand : -
Note : PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase

DNA sequence : 
ATGCGCAGAGCGAAGATCGTTTGTACCATCGGGCCCGTCACAGCGTCCCCCGAGCAGATCCAGAACCTTGTCGACGCCGG
GATGGACGTCGCCCGGATCAACCGCAGCCACGGTGACCCGGAAGAGCACGAGGCGGTCTACCGCAACGTGCGTGCCGCCG
CGAAGGCCTCCGGCCGTTCCGTGGCCGTGCTGGTCGACCTCCAGGGGCCGAAGATCCGCCTCGGCCGGTTCGCCGGTGAC
GAGAAGCACTGGCTCAACGTCGGTGACGTGTTCACCATCACGACCGAGGACGTCGTGGGCACCAAGGAGCTCGTCTCCAC
GACCCACAAGGGTCTGACGGACGACGCCCGTGTCGGCGACCCCCTCCTCATCGACGACGGCCGTGTCCTCGTCCGCGTCA
CCGCCGTCGAGGGTCCGCGCGTCGTGACCCGCGTCGAGGTGTCCGGCCCGGTCTCCAACAACAAGGGCATCAACCTGCCC
GGCGTCGCCGTCTCCGTCCCCGCCATGTCCGACAAGGACGAGGCCGACCTCCGCTGGGCCCTCAAGCTCGGCGCCGACAT
CATCGCGCTCTCCTTCGTGCGCAACGCCGCCGACTACGACGACGTCCGCCGCATCATGGAGGAGGAGGGCCGCGTCCTCC
CCGTCATCGCCAAGGTCGAGAAGCCGCAGGCTGTCGAGAACCTCGCCGAGATCGTGGACGCCTTCGACGGCATCATGGTC
GCCCGTGGCGACCTCGGCGTCGAGCTCCCGCTCGAGCAGGTCCCGCTGGTGCAGAAGCGCGCCGTCGAGCTCGCCCGCCG
TGCCGCCAAGCCGGTCATCGTCGCCACCCAGGTGCTCGAGTCGATGATCTCGGCCCCGCGCCCGACCCGCGCCGAGGCCT
CGGACTGCGCCAACGCCGTCCTCGACGGTGCTGACGCCGTCATGCTCTCGGGCGAGACCAGCGTCGGTGACTACCCGATC
GAGGCCGTGCGCACGATGGCACGCATCATCGAGTCCACCGAGGAGCTCGGCCGGGAGCGCATCGCGCCCCTCGGCTCGAC
CCCGCACACCCGCGGTGGTGCGATCACGCGTGCTGCTGCCGAGATCGGTGAGATCCTCGGCGTCAAGTACCTCGTGACCT
TCACCCAGTCTGGCGACTCGGCGCGTCGTATGTCGCGCCTGCGCTCGGGCCTGCCGCTCCTGGCGTTCACGCCCGACGCA
GCGGTCCGCAACGTCCTGTCCCTCTCCTGGGGCACGCAGTCGTACGAGGTCCCCTCGGTCGACAGCACGGACGCGATGGT
CCGCCAGGTCGACACGACCCTCCAGGCCAACGGTCTCGCCGAGACGGGCGACCTCGTCGTCGTCGTCGCCGGCGCACCGG
TCGGCGTGGCTGGCTCGACGAACTCGATCCTGGTGCACCGCATCGGCGACGAGCTCTGA

Protein sequence : 
MRRAKIVCTIGPVTASPEQIQNLVDAGMDVARINRSHGDPEEHEAVYRNVRAAAKASGRSVAVLVDLQGPKIRLGRFAGD
EKHWLNVGDVFTITTEDVVGTKELVSTTHKGLTDDARVGDPLLIDDGRVLVRVTAVEGPRVVTRVEVSGPVSNNKGINLP
GVAVSVPAMSDKDEADLRWALKLGADIIALSFVRNAADYDDVRRIMEEEGRVLPVIAKVEKPQAVENLAEIVDAFDGIMV
ARGDLGVELPLEQVPLVQKRAVELARRAAKPVIVATQVLESMISAPRPTRAEASDCANAVLDGADAVMLSGETSVGDYPI
EAVRTMARIIESTEELGRERIAPLGSTPHTRGGAITRAAAEIGEILGVKYLVTFTQSGDSARRMSRLRSGLPLLAFTPDA
AVRNVLSLSWGTQSYEVPSVDSTDAMVRQVDTTLQANGLAETGDLVVVVAGAPVGVAGSTNSILVHRIGDEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 2e-76 44
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 1e-76 44
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 1e-76 44
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-76 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sked_20690 YP_003314825.1 pyruvate kinase VFG0479 Protein 5e-77 44