|
Name : Sked_19940 (Sked_19940) Accession : YP_003314752.1 Strain : Sanguibacter keddieii DSM 10542 Genome accession: NC_013521 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 2217811 - 2219988 bp Length : 2178 bp Strand : + Note : PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; Transketolase, thiamine diphosphate binding domain; TIGRFAM: transketolase, bacterial and yeast DNA sequence : GTGAACTCCTTCACCCCAGCGCAGCAGCCCTTCGACTGGTCCGAGCTCGACGACCGCGCGGTCGCCACGATCAAGGCTCT CGCCGCCGACGCCGTCGAGAAGGTCGGCAACGGCCACCCCGGGACCGCGATCTCGCTCGCGCCCGCCGCGTACACGCTCT TCCAGAAGGTCATGCGTCACGACCCGAGCGACTCGCACTGGGTCGGTCGCGACCGCTTCGTGCTGTCTGCCGGTCACTCG TCGCTGACCATCTACCTCCAGCTGTTCCTCTCCGGCTACGACGTCGACATCGACGACATCAAGTCGCTGCGCACCTGGGG CTCGAAGACCCCCGGTCACCCCGAGTACACGCACACCGACGGTGTCGAGATCACCACCGGCCCCCTCGGCCAGGGCCTCG CCTCCGCCGTCGGCATGGCCATGGCGGCCCGTCGCGAGCGCGGCCTGCTCGACCCGAGCACCGCCCCCGGCGAGAGCCCC TTCGACCACTCGATCTTCGTGATCGCCGGCGACGGCGACCTGCAGGAGGGCGTCACCTCCGAGGCCTCGTCCCTCGCGGG CCACCAGCAGCTCGGCAACCTCGTGGTCATCTACGACCAGAACCAGATCTCGATCGAGGACGACACCAACATCTCGTTCT CCGAGGACGTCCTCGCTCGCTACGAGTCCTACGGCTGGCACACCCAGCGCGTCGACTGGACTCAGGGTGGCACCGGCTAC GTCGAGAACGTCGAGGAGCTGCACGCCGCGCTCTCGGCCGCGAAGTCCGAGACCGGCAAGCCGTCGATCATCGCGCTGCG CACCATCATCGGCTGGCCGTCGCCGAAGAAGCAGAACACCGGCAAGATCCACGGCTCGGCGCTCGGCGCCGACGAGGTCG CCGGCCTCAAGGTCAACCTCGGCCTCGACCCGGAGAAGTCCTTCGACGTCGCCGACGAGGTCCTCGCCCACGCCCGCGAG GTCGGTGCCCGCGGCGCCGAGGCCCGCAAGGCCTGGACCGTCGGCTTCGACGCGTGGAAGACCGCCAACCCCGAGGGCGC TGAGCTCCTCGAGCGCCTCACCACCCGCACCCTCCCCGAGGGCTGGGACTCCGTGCTCCCGACCTTCGAGGGCGGCAAGG ACGTCTCGACGCGTGCCGCGTCGGGCAAGGTCCTCACGGCGCTCGCGCCGGTGCTCCCCGAGCTCTGGGGCGGCTCGGCC GACCTCGCCGAGTCCAACAACACCACGATGGAGGGCGAGCCGTCCTTCATCCCCGCCGAGCACTCCACGGCGGCCTGGAC CGGCAACCCCCACGGGCGCACGCTGCACTTCGGCATCCGTGAGCACGCCATGGGCGCGATCCTCAACGGCATCGTGCTGC ACGGCGGGACGCGCGCCTACGGCGGCACGTTCCTCGTGTTCTCCGACTACATGCGTCCGGCGGTCCGCCTCGCGGCCCTC ATGCGCATCCCGTCGACCTTCGTCTGGACCCACGACTCCATCGGTCTCGGCGAGGACGGCCCGACGCACCAGCCGATCGA GCACCTCGCCGCGCTGCGCGCCATCCCCGGTCTCGACGTCGTCCGCCCCGCGGACGCCAACGAGGTCGCCTGGGCCTGGA AGACCATCCTCGGTCACACCGACCGCCCGGCCGGCATCGTCCTGACCCGTCAGAACGTGCCGACCTACGCCCGTGGAGAG GGTGCCGCCACCGGCGAGACCTTCGGCTCGGCCGCTGGCGTCGAGAAGGGTGCCTACGTCCTCGCCGAGGCCCCGAACGG CACGCCCGACGTGATCCTGCTGGGCACCGGCTCCGAGGTCCAGCTGGCCGTCGACGCCCGCGAGGCCCTCAAGGCCGACG GCGTCAACGCCCGCGTGGTGTCCGTCCCGAGCCGCGAGTGGTTCGACCAGCAGGACGCGGAGTACCGCGAGTCGGTCCTC CCCGCCTCGGTCAAGGCCCGCGTGTCGGTCGAGGCCGCCGTGGCCCAGGGCTGGCGCGAGCTCGTCGGCGACGCCGGCCG CTCGATCTCGATCGAGCACTACGGCGCCTCCGCAGACTTCAAGACGCTCTACCGCGAGTTCGGCATCACCACCGAGGCCG TCGTGGCCGCCGCCAAGGAGTCCATCGAGGCCGCGGGCTCCTCCGCCCCCGGCGCAGCCCCGCAGCCCTCCGAGGGCGGC ACGGCCGACCGTCCCTGA Protein sequence : MNSFTPAQQPFDWSELDDRAVATIKALAADAVEKVGNGHPGTAISLAPAAYTLFQKVMRHDPSDSHWVGRDRFVLSAGHS SLTIYLQLFLSGYDVDIDDIKSLRTWGSKTPGHPEYTHTDGVEITTGPLGQGLASAVGMAMAARRERGLLDPSTAPGESP FDHSIFVIAGDGDLQEGVTSEASSLAGHQQLGNLVVIYDQNQISIEDDTNISFSEDVLARYESYGWHTQRVDWTQGGTGY VENVEELHAALSAAKSETGKPSIIALRTIIGWPSPKKQNTGKIHGSALGADEVAGLKVNLGLDPEKSFDVADEVLAHARE VGARGAEARKAWTVGFDAWKTANPEGAELLERLTTRTLPEGWDSVLPTFEGGKDVSTRAASGKVLTALAPVLPELWGGSA DLAESNNTTMEGEPSFIPAEHSTAAWTGNPHGRTLHFGIREHAMGAILNGIVLHGGTRAYGGTFLVFSDYMRPAVRLAAL MRIPSTFVWTHDSIGLGEDGPTHQPIEHLAALRAIPGLDVVRPADANEVAWAWKTILGHTDRPAGIVLTRQNVPTYARGE GAATGETFGSAAGVEKGAYVLAEAPNGTPDVILLGTGSEVQLAVDAREALKADGVNARVVSVPSREWFDQQDAEYRESVL PASVKARVSVEAAVAQGWRELVGDAGRSISIEHYGASADFKTLYREFGITTEAVVAAAKESIEAAGSSAPGAAPQPSEGG TADRP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 3e-117 | 43 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 3e-115 | 43 |
