|
Name : Sked_19760 (Sked_19760) Accession : YP_003314735.1 Strain : Sanguibacter keddieii DSM 10542 Genome accession: NC_013521 Putative virulence/resistance : Unknown Product : RND superfamily drug exporter Function : - COG functional category : R : General function prediction only COG ID : COG2409 EC number : - Position : 2198105 - 2200303 bp Length : 2199 bp Strand : - Note : PFAM: MMPL family DNA sequence : ATGGCTCGGCTGCTCTACAGGTTGGGTGTGCTCAGCGCCCGGCACCGTCTCGTGGTCCTCCTGGTGTGGACCGTCGCCCT CCTCGGTCTCGGCGGCATCGCCGCGACCAGCGCTCAGCTGTCCGAAGAAGAGGGGCTTCCGGAGACCGAGTCGGGTCTGG CGCTCGACATCGTCGAAGCACAGTTCGGCGTCCCGGCCGCCGACTCCCTCTCCGAGCTCCAGCTGGTGCTGGTCGCGGAC GACATCACGTCGGACCCCGCAGCATCCGTCGTGCGAGGCCTGGTGGCTGACGCTCAGGCGCTCCCCAGCGTGACATCGGT CGCGGACCCGCTGGCTCCAGAGACACCGTTCGTCTCCGAAGACCTGACGACGGCCGTCGTGCAGATCAGCTTCACAGACC TGTCCGACGACCTAGACGCTGCAGCAGCAGCCCAGCACGCGACGGAGGACCTCGCAGCGTCCGCCCGTGCCTCCGGGCTG ACCGCCGAGGTCGGCGGTTCCCTCTCGGTCGAACCGGTCGAGCTCATCGGCCCGACCGAGGCCGTCGGTGCGACCGTCGC GTTCCTCGTCCTGCTCGTCACCTACGGCTCGCTCGCTGCCGCGGGCGCGAATATGATCGTCGCGCTCCTCGGCGTCATCG TCGGGACCGTGGGCATCTTCGCATTCTCGGCGCTCGTCCCGGTCGGCTCCGTCACCCCGATCCTGGCGATCATGCTGGGC CTGGCCGTCGGCATCGACTACGGTCTGTTCATCCTGGCGAGGTTCCGGTCAGAGCTCCGCGACGGGCGCGACGTCGAGGA TGCGGTGGGTCGGGCGACCGGCACCGCCGGGACGTCGGTGGTGTTCGCCGGCGCGACCGTGATGATCGCCCTCGCCGGCC TGACCGTCGTCGGCATCCCGACCATCACCGAGATGGGGCTCGCCGCAGCCTCCGCCGTCCTGGTCGCTGTCCTCATGGCA CTGACGCTCCTGCCCGGCCTGATGTCCTGGATGGGCCGCCGCGCCCTGCCACGCGCAGAGCGCGCACACGGTCGCCCGGA CGTGCCGGCGGCTCCGACGCGGACGAGCTTCCTCGAGCGCTGGGGTCGCCGCGTCGTCAGCCGCCCGCTGACGGCACTCG TCCCGGCCACCGCGATCCTGCTCCTCCTGGCCGTCCCGGTGCTCTCGCTCCAGACCGCCCTCACCACCCCCGGCGGTCCC GACCCCGACTCGACGGAGCGCGCCGCCTACGAGATGGTCGCCGACGCGTTCGGGGCCGGAGCCCAGAGCCCGCTCGTCGT CCTCGTCGAACCCGACGGCGCTGACCTGCAGTCCGCGCTCCCCAGTGTCGAGTCAGCCCTCGCTGCGCTCGACGGTGTCT CGGCGGTCGCCCCGGCGCAGACCTCCCCGGACGGCACCACCGCCATCGTCACGGTGGTGCCCACCACCGGCGCGATCGAC CCCGCCACCGATGATCTCGTCGAGGCGATCCGCGGCACCTCCGTCGACGGTGTCCAGATGCTCGTCACTGGGACGACCGC CTTCGCCCTCGATATCGCCGCGCTGCTCACCTCCGCGTTGATGACGTACCTCCTCGTGGTCGTCGGGCTGTCGCTGGTGC TGCTCGTGCTGCTGTTCAGGTCGCTCCTCGTGCCACTGGTCGCGACCGTCGGGTTCCTGCTGTCGCTCGGCGCCGGTCTC GGGGTCATGGTCGCGGTGTTCCAGTGGGGGTGGCTGGACGCACTCATCCAGGCGCCGCAGGGAGACCCGGTGCCGTCCCT GCTGCCGATCCTCGTGGTCGGGATCCTCTTCGGGCTCGCGATGGACTACCAGGTGTTCCTCGTCTCCCGCATGCACGAAG CCCACCGGGCAGGCATGGCACCGTCCGACGCCATCGTCGAGGGCTTCCGGCGCAGCGCCACCGTGGTCGCGGCTGCGGCG TCGATCATGGCCGCGGTCTTCGGCGGCTTCGCCCTCGGCCTCGACCCGCTCGTCGGGTCCATCGCCTTGGCGCTCTCGGT CGGGGTGCTCGCCGACGCCTTCGTCGTGCGGATGGTCGTGGTCCCGGCCCTCCTCGCCCTGCTCGGTGAGAAGGCCTGGT GGATCCCGCGCTGGCTCGGCCGCATCCTGCCCGACCTCGACCCGGAAGGCCACGCGCTCGACGACAGCCCCACCAGCGTC GAGACGCAGCAGCGGGAGCTGGCAGGTCAGAGCCTGTGA Protein sequence : MARLLYRLGVLSARHRLVVLLVWTVALLGLGGIAATSAQLSEEEGLPETESGLALDIVEAQFGVPAADSLSELQLVLVAD DITSDPAASVVRGLVADAQALPSVTSVADPLAPETPFVSEDLTTAVVQISFTDLSDDLDAAAAAQHATEDLAASARASGL TAEVGGSLSVEPVELIGPTEAVGATVAFLVLLVTYGSLAAAGANMIVALLGVIVGTVGIFAFSALVPVGSVTPILAIMLG LAVGIDYGLFILARFRSELRDGRDVEDAVGRATGTAGTSVVFAGATVMIALAGLTVVGIPTITEMGLAAASAVLVAVLMA LTLLPGLMSWMGRRALPRAERAHGRPDVPAAPTRTSFLERWGRRVVSRPLTALVPATAILLLLAVPVLSLQTALTTPGGP DPDSTERAAYEMVADAFGAGAQSPLVVLVEPDGADLQSALPSVESALAALDGVSAVAPAQTSPDGTTAIVTVVPTTGAID PATDDLVEAIRGTSVDGVQMLVTGTTAFALDIAALLTSALMTYLLVVVGLSLVLLVLLFRSLLVPLVATVGFLLSLGAGL GVMVAVFQWGWLDALIQAPQGDPVPSLLPILVVGILFGLAMDYQVFLVSRMHEAHRAGMAPSDAIVEGFRRSATVVAAAA SIMAAVFGGFALGLDPLVGSIALALSVGVLADAFVVRMVVVPALLALLGEKAWWIPRWLGRILPDLDPEGHALDDSPTSV ETQQRELAGQSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CMM_0093 | YP_001220832.1 | RND family transporter | Not tested | chp/tomA region | Protein | 1e-130 | 56 |
| cur_1489 | YP_001800883.1 | RND superfamily drug exporter | Not tested | Not named | Protein | 1e-67 | 43 |
