Gene Information

Name : Sked_19170 (Sked_19170)
Accession : YP_003314676.1
Strain : Sanguibacter keddieii DSM 10542
Genome accession: NC_013521
Putative virulence/resistance : Unknown
Product : daunorubicin resistance ABC transporter ATP-binding subunit
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 2129333 - 2130502 bp
Length : 1170 bp
Strand : -
Note : PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit

DNA sequence :
GTGATCTCCATCCACGGACTCACCAAGCGATTCGGCGACTTCCAGGCCCTGGCCGGGGTGGAGCTCGAGGTGCCCGAGGG
CAGCGTGCAGGGCCTGCTCGGCCCCAACGGCGCCGGCAAGACCACGACGGTGCGCGTGCTCACGACACTCCTTGAGCCTG
ACGCGGGGGAGGTGACGGTCGCGGGGCACTCGGTGCGCACGGCTGGTCACCTCGTCCGACGCAACCTCGGGGTGTCGGGG
CAGTACGCGGCCGTCGACGACAAGCTCAGCGGCTTCGAGAACCTCACCATGGTGGGGGAGCTGTACGGCATGCGGCGCTC
GCAGGCGAAGGCCCGGGCGCGCGAGCTGCTCCGCGACTTCCGCCTCGACGACGTGGCCGACTCCAAGCAGGCCGGCTCGT
ACTCGGGCGGCATGAAGCGCAGGCTCGACCTGGCGGGTGCGATCGTCGCCCGCCCTCCCGTCGTGATCCTCGACGAGCCG
ACGACCGGGCTGGACCCGCGTGGGCGCCGGGACACGTGGGACGCGATCGAGTCCCTCGCCACCTCGGGGACGACGGTCCT
CCTCACGACGCAGTACCTCGAGGAGGCCGACCAGCTCGCGGACAAGATCGCCGTCATCGACGCCGGGGCCATCATCGCCG
AGGGGACCGCGACCGAGCTCAAGGCCCAGGCGGGCGGCGCGTGGATCGACATCGTCATCGCGCCCGGCTCGGACGGCGCA
GCGGCCCTGGCCGCGGCACGTCGGACCGCGCAGGACGCGATGCTCGACGAGCGCTCGCGACGTCTCACGGCGCGCGCGAC
CGGTGGCAGCGACGCGTTCCGCGCCGTCCTGCACGCCCTCGCCGACGCGCAGGTCGACGTCGCCGAGGCGGCGCTGCGTC
AGCCGACCCTCGACGAGGTGTTCCTCCGTCTGACCGGCAGCACCGCCACCGAGGCGGGTGCTGAGGCTGACTCGGAGGCG
CACGACGACGGTGCTGGTGATGCGGACGTACGAGACGGCGACAGCCGAGACAGCGACGGTCATGACGGCGAGCGGTCGCC
CGAGCCGAGCCGCGCACGCCGGCTCCAGACGACCGGCTCGTCCGAGAGGTCCGGTGATGCGGCCGAGACGGGCGCCACCG
AGAGTCCTGACGGCGAGCCCGACAAGACCAGCAAGGTGGTGGTGTCATGA

Protein sequence :
MISIHGLTKRFGDFQALAGVELEVPEGSVQGLLGPNGAGKTTTVRVLTTLLEPDAGEVTVAGHSVRTAGHLVRRNLGVSG
QYAAVDDKLSGFENLTMVGELYGMRRSQAKARARELLRDFRLDDVADSKQAGSYSGGMKRRLDLAGAIVARPPVVILDEP
TTGLDPRGRRDTWDAIESLATSGTTVLLTTQYLEEADQLADKIAVIDAGAIIAEGTATELKAQAGGAWIDIVIAPGSDGA
AALAAARRTAQDAMLDERSRRLTARATGGSDAFRAVLHALADAQVDVAEAALRQPTLDEVFLRLTGSTATEAGAEADSEA
HDDGAGDADVRDGDSRDSDGHDGERSPEPSRARRLQTTGSSERSGDAAETGATESPDGEPDKTSKVVVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDC7B_2054 YP_005163495.1 methionine import ATP-binding protein Not tested Not named Protein 1e-43 44
CDCE8392_1976 YP_005134507.1 methionine import ATP-binding protein Not tested Not named Protein 1e-43 44