Gene Information

Name : Sked_19080 (Sked_19080)
Accession : YP_003314667.1
Strain : Sanguibacter keddieii DSM 10542
Genome accession: NC_013521
Putative virulence/resistance : Virulence
Product : Fe3+-hydroxamate ABC transporter periplasmic protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0614
EC number : -
Position : 2119879 - 2120922 bp
Length : 1044 bp
Strand : +
Note : PFAM: Periplasmic binding protein

DNA sequence :
ATGACCCGCGCCGCCAGCACGTCCCGCGCACCCCGCCTGATCGCGCTCTCGAGCGCCGCGCTCCTCACCCTCGGCCTCGC
CGCGTGCTCGTCCGACGCACCGGCCGAGGAGTCCACCAGCGCGGCGGGCTTCGAGCCCATCGTCATCGAGCACGCCCTGG
GCACCACGACCATCGAGTCGAAGCCCGAGCGCGTCGCCACGGTCCAGTGGGCCAACCACGAGGTCCCCCTCGCCCTGGGC
GTCGTGCCCGTCGGCATGGCCGCCGCGAACTTCGGCGACGACGACGGCGACGGCCTGCTCCCCTGGGTCGACGAGAAGCT
CGAGGAGCTCGGCGCCGAGACGCCCGTCCTCTTCGACGAGACCGACGGCATCGACTTCGAGGCCGTGGCCGACACGAACC
CCGACGTCATCCTCGCCGCGTACTCCGGCCTCACGCAGGAGGACTACGACACCCTCAGCGAGATCGCGCCGGTCGTCGCC
TTCCCCGAGACCGCCTGGGGCACCTCGTGGCGCGACATGATCCACCTCAACGCCGAGGCCATGGGCATGGCCGACGAGGG
CGACGCCCTCGTCACCGAGCTCGAGGACGAGATCACCGAGAAGGCCGCCGCGTACCCGCAGCTCGAGGGCACCTCCGCGA
TGTTCCTCACCCACGTGGACACCACCGACCTCAGCCAGGTGAGCTTCTACACCTCGCACGACACCCGCGCCATGTTCTTC
GAGGACATCGGCCTCACCACCCCCGAGAGCATCGCGACCGCGACGGCCTCGACCGACCTGTTCGCCCTCACGCAGAGCGC
CGAGCAGGCCGACGCGTTCAGCGACGTCGACCTCATCGTCACCTACGGCGGCGACGAGCTCGTGACCGCCCTCGAGGCCG
ACCCGCTGCTCTCGCAGGTCCCCGCCGTCGCCAACGGCTCGATCGTCAACCTGCCCGGCACCAGCCCGCTCGGCACCGCC
GCGAACCCGACGCCGCTGTCCATCTCCTGGATCCTCGACGACTACCTCGAGCTGCTCGGCGCAGCAGCCGACAACGCGAA
GTGA

Protein sequence :
MTRAASTSRAPRLIALSSAALLTLGLAACSSDAPAEESTSAAGFEPIVIEHALGTTTIESKPERVATVQWANHEVPLALG
VVPVGMAAANFGDDDGDGLLPWVDEKLEELGAETPVLFDETDGIDFEAVADTNPDVILAAYSGLTQEDYDTLSEIAPVVA
FPETAWGTSWRDMIHLNAEAMGMADEGDALVTELEDEITEKAAAYPQLEGTSAMFLTHVDTTDLSQVSFYTSHDTRAMFF
EDIGLTTPESIATATASTDLFALTQSAEQADAFSDVDLIVTYGGDELVTALEADPLLSQVPAVANGSIVNLPGTSPLGTA
ANPTPLSISWILDDYLELLGAAADNAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09530 YP_002510936.1 iron-siderophore binding lipoprotein Virulence PPI-1 Protein 4e-66 45
SP_1032 NP_345507.1 iron-compound ABC transporter iron compound-binding protein Virulence PPI-1 Protein 4e-66 45