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Name : Sked_01720 (Sked_01720) Accession : YP_003312978.1 Strain : Sanguibacter keddieii DSM 10542 Genome accession: NC_013521 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 178837 - 180105 bp Length : 1269 bp Strand : + Note : PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase DNA sequence : GTGGTTCGCGACAACCCTGACCTCGTCCGTGCAAGCCAGGTCGCCCGAGGCGACGACCCGGCCCTCGTCGACCAGGTGCT CGACGCCGACTCCCGGCGCCGCAGCGCGCTGACGGAGTTCGAGCAGCTGCGCGCCGAGCAGAAGTCCCTCGGCAAGGAGG TCGCCAAGGCTCAGGGCGACGAGCGCGCGGCGCTGCTCGCCCGCACCAAGACCATCGCCGAGCAGGTCAAGGCCCTGCAG GCCGACGCCGACGACGCCGACACGACCCTCACCGAGCTCAGCCGGCAGATCGCCAACATCGTGGAGGGCGCGCCCGCCGG CGGCGAGGACGACTACGTCGTGCTCCGCACCGAGGGCACGATCCGCGACTTCCAGGCCGAGTACGGCGCCGACTTCGTGC CGCGCGACCACCTCGACCTCGGCGAGCGCCTCAAGGCCATCGACACCGAGCGCGGTGCCAAGGTCTCGGGCTCGCGCTTC TACTACCTCACCGGCATCGGGGCCCGCCTCGAGCTCGCGCTGCTCAACGCCGCGATGGACCAGGCCTACGCGGCCGGCTT CACGCCGATGATCACCCCGACCCTCGTCAAGCCCGAGATCATGGCGGGCACCGGGTTCCTCGGCGCGCACGCCGACGAGA TCTACCGCCTCGAGGCAGACGACCTCTACCTCACCGGGACGAGCGAGGTCGCGCTCGCGGGCTACCACTCGAACGAGATC CTCGACCTGTCCGACGGGCCGCAGCGCTACGCCGGGTGGAGCGCCTGCTACCGCCGCGAGGCCGGCTCGTACGGCAAGGA CACCCGCGGGATCATCCGAGTGCACCAGTTCCACAAGGTCGAGATGTTCAGCTACGTCCCCGTCGAGGAGGCCGACGCCG AGCACGAGCGCCTGCTCGCCTGGGAGGAGCAGATGCTCGCCAAGGCCGAGCTGCCCTACCGCGTGATCGACACGGCCGCC GGTGACCTCGGCTCGAGCGCCGCCCGCAAGTTCGACTGCGAGGCGTGGCTGCCCACCCAGAACCGGTTCCTCGAGCTCAC CTCGACGTCCAACTGCACCACCTTCCAGGCGCGTCGCCTGGGCATCCGGGAGCGCACCGCGGCCGGCGACACCCGTCCGG TCGCGACGCTCAACGGGACGCTCGGCACCACGCGCTGGATCGTCGCGATCCTCGAGAACCACCAGCAGGCCGACGGCTCG GTCCGCGTGCCTGAGGGCCTGCGCCCGTACCTGGGCGGCCTCGAGGTCCTCGAGCCGGTCTCGGCATGA Protein sequence : MVRDNPDLVRASQVARGDDPALVDQVLDADSRRRSALTEFEQLRAEQKSLGKEVAKAQGDERAALLARTKTIAEQVKALQ ADADDADTTLTELSRQIANIVEGAPAGGEDDYVVLRTEGTIRDFQAEYGADFVPRDHLDLGERLKAIDTERGAKVSGSRF YYLTGIGARLELALLNAAMDQAYAAGFTPMITPTLVKPEIMAGTGFLGAHADEIYRLEADDLYLTGTSEVALAGYHSNEI LDLSDGPQRYAGWSACYRREAGSYGKDTRGIIRVHQFHKVEMFSYVPVEEADAEHERLLAWEEQMLAKAELPYRVIDTAA GDLGSSAARKFDCEAWLPTQNRFLELTSTSNCTTFQARRLGIRERTAAGDTRPVATLNGTLGTTRWIVAILENHQQADGS VRVPEGLRPYLGGLEVLEPVSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 7e-62 | 43 |
