|
Name : Sked_16500 (Sked_16500) Accession : YP_003314419.1 Strain : Sanguibacter keddieii DSM 10542 Genome accession: NC_013521 Putative virulence/resistance : Unknown Product : ABC transporter ATPase Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 1850811 - 1852406 bp Length : 1596 bp Strand : - Note : PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK DNA sequence : ATGAGCACCCCGGTCCTGACAGTCACCGACCTCAGCGTCTCCATCGGACGACGCGAGATCGTCCACGGGCTCGGCTTCGC CGTCGAGCCTGGTGGCACGCTCGGCATCGTCGGCGAGTCCGGCTCCGGCAAGTCGCTCTCCGTGCTCGCCGCGACCGGCC TGCTCGACGCACCCGGTGCGCGGGTCACCGGCAGCAGCGTGCTGCGCGGTGCGGGCGACAAGGACGGCGTGCAGCTGGTC GGCGCCTCCCCCAAGGCGCTGCGGAAGGTGCACGGCAACAGCATCGGCTTCGTGTTCCAGGACCCGAGCACGTCGCTGCA CCCGCTGCTGACCCTCGAGCGGCAGATCACCGAGACCCTCGAGACGCACCGCGGGCTGTCCCGCCGCCAGGCGCGCACCC GGGCCCTCGAGCTCCTCGAGGCCGTCGGGCTCCCCGACCCGGAGCGTCGCCTCGACTCGTACCCGCACCAGCTCTCCGGC GGGCAGCGCCAGCGCGTGATGATCGCGATCGCCCTGGCCTGCGACCCGGCGCTGCTGGTCGCCGACGAGCCCACCACGGC GCTCGACGTCACCACCCAGGCGCAGATCATCAGCCTGGTCCAGCAGCTCCAGCACGACCGCGGCACCGCCGTCGTGTGGA TCAGCCACGACCTGGGGGTCGTGGGCCAGGTCGCCGACGACGTCCTCGTGCTGCGCGACGGCGAGGCCGTCGAGCACCGC CCCGTGCTCGACCTGCTCGACTCACCGCAGCACCCGTACACGCAGAAGCTGCTCGAGGCGCGACCCCGCCTCGGCAAGGT CGCTCCCCCGGCGCCCGAGGGCGAGGTGCTGCTCTCCGTGCGGGACCTCGACGTGAAGTTCCCCGTGCAGACGCCGGTCG GCAAGACGGTGGTGCACGCGGTCGACGGCGTGTCCTTCGACGTGCAGCGTGGGCGGACCCTCGGGATCGTCGGCGAGTCC GGGTCGGGCAAGTCGACCATCGCCAACGCCCTCACCGGGCTGGTCGCCCCCGAGTCCGGGACCGCGACCCTCGGCGGCAC CGACCTGTTCCGCGCCGACCGCGGCCTGCGCCGCCGGCTCGCCATGGTGTTCCAGGACCCGTTCTCGTCCCTCGACCCGC GCATGCGCGTCGGCGACTCCATCGACGAGCCGCTGCGCGTCCACGGCCTCCCGTCCTCCGGCACGCGTGCCGAGCGGATC GAAGAGCTGCTGGGACTCGTCGACCTGCCCGCCGACTTCGCGACCCGCTACCCCCACGAGCTCTCCGGCGGGCAGCGCCA GCGCATCTCGATCGCCCGCGCGCTCGCCCTCGAGCCCGACGTCGTCATCCTCGACGAGGCCACGGCTTCATTGGACGTGT CGATCCAGGCCCGGGTCCTCGAGCTGCTGCGCCGCCTGCAGGTCGAGCTCGGCCTCACCTACGTGTTCATCGCCCACGAC CTCGCGATCGTCCAGGAGATGAGCCACGACGTCCTGGTCATGCAGAACGGCCGCGCCGTCGAGCACGCCCCCGCCGGGCG GCTCTTCGCCGAACCGGCCGAGGAGTACACCCGGGCGCTGCTCGCGGCGGTCCCGCCGGAGCGGCCTGGGCGGTAG Protein sequence : MSTPVLTVTDLSVSIGRREIVHGLGFAVEPGGTLGIVGESGSGKSLSVLAATGLLDAPGARVTGSSVLRGAGDKDGVQLV GASPKALRKVHGNSIGFVFQDPSTSLHPLLTLERQITETLETHRGLSRRQARTRALELLEAVGLPDPERRLDSYPHQLSG GQRQRVMIAIALACDPALLVADEPTTALDVTTQAQIISLVQQLQHDRGTAVVWISHDLGVVGQVADDVLVLRDGEAVEHR PVLDLLDSPQHPYTQKLLEARPRLGKVAPPAPEGEVLLSVRDLDVKFPVQTPVGKTVVHAVDGVSFDVQRGRTLGIVGES GSGKSTIANALTGLVAPESGTATLGGTDLFRADRGLRRRLAMVFQDPFSSLDPRMRVGDSIDEPLRVHGLPSSGTRAERI EELLGLVDLPADFATRYPHELSGGQRQRISIARALALEPDVVILDEATASLDVSIQARVLELLRRLQVELGLTYVFIAHD LAIVQEMSHDVLVMQNGRAVEHAPAGRLFAEPAEEYTRALLAAVPPERPGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 3e-96 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 1e-81 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-81 | 42 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-81 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-81 | 42 |
