Gene Information

Name : Sked_14670 (Sked_14670)
Accession : YP_003314237.1
Strain : Sanguibacter keddieii DSM 10542
Genome accession: NC_013521
Putative virulence/resistance : Resistance
Product : arsenical-resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0798
EC number : -
Position : 1648139 - 1649254 bp
Length : 1116 bp
Strand : -
Note : PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein

DNA sequence :
GTGACTGACGTCTCCGCTGCGACCACGACGACCGGCCCAGGCTCACCGCCCCGGCTCTCCACCCTCGACCGCTGGCTGCC
GGCGTGGATCGGCCTGGCGATGGTCGCCGGCCTGCTGCTCGGACGCTTCATCCCGGGCGTCTCCGACGTGCTCTCCCGCA
TGGAGGTCGGCGGCATCTCGGTGCCGATCGGGCTCGGGCTGCTGGTGATGATGTACCCGGTGCTGGCCAAGGTCCGTTAT
GACAAGGTCGCCGCCGTGACCGGGGACAAGCGCCTGCTGTTCAGCTCCCTGGCGCTGAACTGGATCATCGGCCCCGGGGT
GATGTTCGCCCTGGCGTGGATCTTCCTGCCCGACCTTCCCGAGTACCGCACGGGCCTGATCATCGTGGGGCTGGCGCGCT
GCATCGCGATGGTCGTCATCTGGAACGACCTGGCCTGCGGTGACCGGGAGGCCGCTGCGGTGCTCATCGCGATCAACTCC
GTGTTCCAGGTCGTCGCCTTCTCGCTCCTGGGCTACTTCTACCTCACCGTCCTGCCTGGCTGGCTCGGCCTCGACACCGC
AGGCCTGGACATCTCGATGGGCCAGATCGCCCTCAACGTCCTGGTCTTCCTCGGCGTCCCGCTCGTAGCCGGCTTCGCCT
CACGGGCCGTCGGCGAGCGGACCAAGGGACGCCAGTGGTACGAGGAGACCTACCTGCCCGTCATCGGACCCTGGGCGCTC
TATGGGCTGCTGTTCACGATCGTGCTGCTCTTCGCCCTCCAGGGCGACGCGGTCACCTCGAATCCGCTCGACGTCGCCCG
CATCGCCCTGCCGCTGCTGGTCTACTTCGCCCTCATGTGGGGCCTGGGCATCGTGACCGGCAAGACCCTGGGCCTGGGGT
ACGCGAAGTCCACCACGCTGGCCTTCACCGCAGCAGGCAACAACTTCGAGCTCGCGATCGCCGTGGCGATCGGCACCTTC
GGCGCGACGTCCGGGCAGGCTCTGGCCGGGGTCGTCGGGCCGCTCATCGAGGTCCCCGTCCTGGTCGCCCTCGTCTACGT
GACCTTGTGGGTCGGGCGGCGCTGGTTCGCCGTAGACCCCTACCAGACCGTCTCCGACCGACAGGTGCAGCCATGA

Protein sequence :
MTDVSAATTTTGPGSPPRLSTLDRWLPAWIGLAMVAGLLLGRFIPGVSDVLSRMEVGGISVPIGLGLLVMMYPVLAKVRY
DKVAAVTGDKRLLFSSLALNWIIGPGVMFALAWIFLPDLPEYRTGLIIVGLARCIAMVVIWNDLACGDREAAAVLIAINS
VFQVVAFSLLGYFYLTVLPGWLGLDTAGLDISMGQIALNVLVFLGVPLVAGFASRAVGERTKGRQWYEETYLPVIGPWAL
YGLLFTIVLLFALQGDAVTSNPLDVARIALPLLVYFALMWGLGIVTGKTLGLGYAKSTTLAFTAAGNNFELAIAVAIGTF
GATSGQALAGVVGPLIEVPVLVALVYVTLWVGRRWFAVDPYQTVSDRQVQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 2e-61 51
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 1e-76 50
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 8e-77 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sked_14670 YP_003314237.1 arsenical-resistance protein BAC0573 Protein 5e-88 53
Sked_14670 YP_003314237.1 arsenical-resistance protein BAC0004 Protein 1e-66 47