Gene Information

Name : Sked_14270 (Sked_14270)
Accession : YP_003314197.1
Strain : Sanguibacter keddieii DSM 10542
Genome accession: NC_013521
Putative virulence/resistance : Unknown
Product : ABC transporter ATPase
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 1604563 - 1606296 bp
Length : 1734 bp
Strand : -
Note : PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK

DNA sequence :
ATGACCGTCACCACGCCCGTCACCGGCTCGGCCGCCGACGCCACCGAGGACCTCATCCTGTCCGTGCGCGGCCTGCGCAC
CACCTTCGCCGGGCTGCACGGCCCGGTCCACGCCGTCCAGGACGTCGACCTCGACCTGCGCCGGGGCACGACCCTCGCGG
TCGTCGGCGAGTCCGGGTCCGGCAAGTCCGTGACGGTGCGCTCCCTGCTGGGGATCCTCGACCCCGGCGGGCGCGTCGAG
GCCGGCACCGCCCTGTTCCGCGCCGGCGCCGGCGACGCACCCGTCGACCTCCTGCAGCTCGGGCCCAAGAGCACCGCGCT
GCGCGAGGTGCGCGGCAAGCAGGTGGGCATGATCTTCCAGGAGCCCATGGCGTCCCTCTCCCCCATGCAGACCATCGGCG
CGCACATCGTCGAGGTCCTGCGCATCCACCTGGGCATGACCAAGGCCGAGGCCCGCGAGCGCGGCATCTCCCTGCTGCGG
CGGGTGGGCATCGCGGACCCGGCGCGCTGCATGGACAGCTACTCGTTCCAGCTGTCGGGCGGCATGTGCCAGCGTGCGAT
GATCGCGCTGGCGCTGGCGTGCGACCCGCGGCTGCTCATCGCCGACGAGCCGACCACGGCGCTCGACGTCACGACCCAGG
CGAAGGTCCTCGACCTGCTGGAGGAGACGACGGCGGAGTCGAACCTGTCGGTCCTGTTCATCACGCACGACCTCGGTGTG
GTCGCGCGGGTGGCCGACCACGTGGCGGTGATGCGGTACGGGGCGCTCGTGGAGAGCGGGCCGGCGGCGCAGGTCTTCGA
GGACCCGCAGCACGAGTACACCCAGCAGCTGGTGCGCGCGTCGACGGTGAAGCCCCGGCACGCGCGAGCACAGCCGCGGG
CCGAGAGCGGCGCGAGCGCTCCGGCGGACCTGCTGCCGGTCGTGGAGGTCAGCGACCTGCACGTGACCTTCGGCGGGAAG
GCGCGGGCCTTCTCGCGCAGGGCCGAGCCGGTGCACGCCGTCGCGGGGGTGACCCTCGAGGTGCTGCCGGGCGAGACCCT
CGGTCTGGTCGGTGAGTCGGGCTCGGGGAAGACGACGACAGGCCGGGCGGTCGTGGGTGCGCAGGTCACCACGGGCGGCT
CGGTCGTCTACCGCGACGCCGACGGCGTCACGCACGACCTCGTCGCGATGTCGAAGGAGGCACGGCGCGGGTTCCGGACC
GACGTCCGCATGGTGTTCCAGGACCCGTACACCTCGCTCAACCCGCGGATGCGGCTGCTCGAGATCCTCGCGGAGCCGTT
GCGCATCAACCACCTGGCGTCAGGCTCCGAGATGCAGGACCGCGTGGCGGCAGCCCTGGAGCGGGTGGGGCTCGAGGCGG
ACCACATGAACCGGTACCCGCACGCGTTCTCGGGCGGGCAGCGTCAGCGGGTCAACATCGCGCGGGCGCTCATCACCGAG
CCGCGCCTCGTGGTCGCCGACGAGGCGGTGTCGGCCCTCGACGTGTCGGTCCGGGCGCAGATCCTCGAGCTGCTCAACGG
GCTGCAGGACGACTTCGGCCTCGCGTACCTGTTCATCTCGCACGACCTGTCGGTCGTGGAGTCCGTGTGCGACCGCGTGG
CGGTGATGCAGCACGGGATGATCGTGGAGTCCCGCCCCACGGCGGACCTGTTCGCCGAGCCGCAGCACGAGTACACGCGG
ATGCTGCTGGACTCGGTGCCGGTGCCCGACCCGAGCGCGTACGCGCGCCGATGA

Protein sequence :
MTVTTPVTGSAADATEDLILSVRGLRTTFAGLHGPVHAVQDVDLDLRRGTTLAVVGESGSGKSVTVRSLLGILDPGGRVE
AGTALFRAGAGDAPVDLLQLGPKSTALREVRGKQVGMIFQEPMASLSPMQTIGAHIVEVLRIHLGMTKAEARERGISLLR
RVGIADPARCMDSYSFQLSGGMCQRAMIALALACDPRLLIADEPTTALDVTTQAKVLDLLEETTAESNLSVLFITHDLGV
VARVADHVAVMRYGALVESGPAAQVFEDPQHEYTQQLVRASTVKPRHARAQPRAESGASAPADLLPVVEVSDLHVTFGGK
ARAFSRRAEPVHAVAGVTLEVLPGETLGLVGESGSGKTTTGRAVVGAQVTTGGSVVYRDADGVTHDLVAMSKEARRGFRT
DVRMVFQDPYTSLNPRMRLLEILAEPLRINHLASGSEMQDRVAAALERVGLEADHMNRYPHAFSGGQRQRVNIARALITE
PRLVVADEAVSALDVSVRAQILELLNGLQDDFGLAYLFISHDLSVVESVCDRVAVMQHGMIVESRPTADLFAEPQHEYTR
MLLDSVPVPDPSAYARR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 7e-97 41