|
Name : Sked_13340 (Sked_13340) Accession : YP_003314108.1 Strain : Sanguibacter keddieii DSM 10542 Genome accession: NC_013521 Putative virulence/resistance : Resistance Product : SSS sodium solute transporter Function : - COG functional category : R : General function prediction only COG ID : COG4147 EC number : - Position : 1500576 - 1502246 bp Length : 1671 bp Strand : + Note : PFAM: Sodium:solute symporter family; TIGRFAM: SSS sodium solute transporter superfamily DNA sequence : ATGACCGGCACCGTCTCCGCCGCAGGCACGGCCGACCAGGGCTACGTGCTCGCCGCCTCCGAGGACATCGGCAACCCGGT CGTCAACATCGGCATCTTCCTCGCCTTCGTGGCGGTCACCCTCGTGGTGGTGCTGCGGGCCTCGCGGACCAACAAGACCG CCGAGGACTACTACGCCGGCGGGCGCTCCTTCACCGGTCCGCAGAACGGCACCGCGATCGCGGGGGACTACCTGTCGGCC GCGAGCTTCCTCGGCATCGTCGGGGCCATCGCGATCAACGGCTACGACGGGTTCCTCTACTCCATCGGGTTCCTCGTCGC GTGGCTCGTCGCGCTGCTGCTCGTCGCCGAGCTGCTCCGCAACACCGGCAAGTTCACGATGGCCGACGTCCTGTCCTTCC GGCTCAAGCAGCGCCCCGTCCGCATGGCCGCAGCCCTGACGACGCTCGCAGTCGTGTTCTTCTACCTGCTCGCCCAGATG GCCGGCGCCGGGGGACTGGTCGCGCTGCTGCTGGGCATCGACAGCTCCGGCGGACAGGCCGTCGTCATCGCCGTGGTCGG TGCGCTGATGATCCTCTACGTGCTCATCGGCGGGATGAAGGGCACCACCTGGGTGCAGATCATCAAGGCCATCCTGCTCA TCGCCGGCGCCGGGATCATGACCGTGTGGGTGCTCGCCAAGTTCGGCTTCAACCTCTCCGACGTGATCCAGGGCGCCATC GACACCTCCGGCATCGCCGGCCTGGCCGAGCCCGGCGCGCAGTACGGCGGCAGCGAGACGAGCAAGCTGAACTTCCTGTC GCTCGCCCTGGCCCTCGTGCTCGGCACGGCGGGCCTGCCGCACGTGCTCATGCGCTTCTACACGGTGCCCACCGCCAAGG AGGCCCGCCGGTCCGTGGTCTGGGCCATCTGGCTCATCGGCATCTTCTACCTCTTCACCCTCGTCCTCGGCTACGGGGCC GGGGCGCTCGTTGGCGCCGACACGATCAACGCCGCACCGGGTGGCGTGAACTCGGCCGCGCCGCTGCTGGCCTTCGCCCT CGGCGGCGAGATCCTGCTCGGGCTCATCTCCGCGGTGGCCTTCGCGACCATCCTCGCGGTGGTCGCCGGGCTCACCATCA CCGCGGCGGCGAGCTTCGCGCACGACATCTACGCCTCCGTCATCAAGAAGGGCGAGGTGAACCCGGACGGCGAGGTCAAG GTCGCCCGGATGACCGTCGTGGTCATCGGGCTGCTGGCGATCGTCGGCGGCATCTTCGCCAACGGCCAGAACGTCGCTTT CCTCGTGGCCCTGGCCTTCGCCGTCGCGGCGAGCGCCAACCTGCCGACCATCATCTACTCGCTGTTCTGGAAGCGCTTCA ACACCCGGGGAGCGCTGTGGAGCATGTACGGCGGCCTCGCGTCGTGCCTCGTGCTCATCACCTTCTCGCCCGTCGTCTCG GGCAAGACGGACGACGCCGGCAACAGCCTGTCGATGATCCGCGACACCGGCATCGACTTCGCGTGGTTCCCGCTCGAGAA CCCCGGCATCGTCACCATCCCGCTCGGGTTCCTGCTCGGCATCGTCGGCACCCTCACCAGCCGCGAGAAGGGAGACAAGG CCAAGTACGCCGAGATGGAGGTGCGCTCCCTCACAGGCGCCGGCTCCGAGAAGGCCGCCACCAACCACTAG Protein sequence : MTGTVSAAGTADQGYVLAASEDIGNPVVNIGIFLAFVAVTLVVVLRASRTNKTAEDYYAGGRSFTGPQNGTAIAGDYLSA ASFLGIVGAIAINGYDGFLYSIGFLVAWLVALLLVAELLRNTGKFTMADVLSFRLKQRPVRMAAALTTLAVVFFYLLAQM AGAGGLVALLLGIDSSGGQAVVIAVVGALMILYVLIGGMKGTTWVQIIKAILLIAGAGIMTVWVLAKFGFNLSDVIQGAI DTSGIAGLAEPGAQYGGSETSKLNFLSLALALVLGTAGLPHVLMRFYTVPTAKEARRSVVWAIWLIGIFYLFTLVLGYGA GALVGADTINAAPGGVNSAAPLLAFALGGEILLGLISAVAFATILAVVAGLTITAAASFAHDIYASVIKKGEVNPDGEVK VARMTVVVIGLLAIVGGIFANGQNVAFLVALAFAVAASANLPTIIYSLFWKRFNTRGALWSMYGGLASCLVLITFSPVVS GKTDDAGNSLSMIRDTGIDFAWFPLENPGIVTIPLGFLLGIVGTLTSREKGDKAKYAEMEVRSLTGAGSEKAATNH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1523 | YP_001800917.1 | transporter | Not tested | Not named | Protein | 9e-84 | 63 |
| unnamed | AAK01502.1 | putative amino acid transport protein | Not tested | PAGI-1 | Protein | 3e-38 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sked_13340 | YP_003314108.1 | SSS sodium solute transporter | BAC0570 | Protein | 5e-38 | 50 |
| Sked_13340 | YP_003314108.1 | SSS sodium solute transporter | BAC0564 | Protein | 2e-39 | 43 |
