Gene Information

Name : Sked_10850 (Sked_10850)
Accession : YP_003313865.1
Strain : Sanguibacter keddieii DSM 10542
Genome accession: NC_013521
Putative virulence/resistance : Unknown
Product : pyridoxal phosphate enzyme, YggS family
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 1264026 - 1264847 bp
Length : 822 bp
Strand : -
Note : PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family

DNA sequence :
ATGCTGTCCATGCCCCCGACCGCCCCGAGCGACCCGACGCCCACGCCGTCCTTCGCAGACGCACTCGCCCGCGTGCACGA
CCGCATCGAGCGAGCACGCACCTCCGCCGGGCGCGACGACCGCGACGGCAGCGACGGCAGCGACGACAAGGTCCGGCTGC
TGCTCGCCACCAAGACGCAGGACGCCGACGACGTCCGCGCCGCCGTGCTCGCCGACCGCGCAGCAGGCCGCCCCGGCGAG
GTCCTCGTCGGCGAGAACCGGGTGCAGGAGCTCACCGCGAAGGCACCGGCGCTGGCAGACCTCGCCCTGACCGTGCACCT
CATCGGCGCCCTGCAGTCCAACAAGGTCAACCACGCCCTGCGCGCGCTCGCCCAGCACCGCCAGGCCTGCGTCGAGACCG
TCGACTCCATCGCCCTCGCCGAGAAGATCGGCAGCCGGGTGCTCACAGCGGCCGCAGAGGCAGGTGACGGGAGCACGGAC
ATCCCGCTCGACGTCTACGTGCAGGTGAACGTCTCGGGCGAGGAGTCCAAGGCCGGGGTCTCCCCCGAGGCGGCGGTCGA
GCTCGCGCTCGCGGTCGCCGAGGTCGACGGTCTCCGTCTCTCCGGGTTCATGACGATCGGGGCACGGTCGTCGGACGAGC
GCCTGGTCCGCGCAGGCTTCGCGAGGCTGCGTGAGCTCCGCGACGAGGTCCTCGGGTCGGGGGCGCCGGGGACCTCGGCT
GCCACCGAGCTGTCGATGGGCATGTCGCAGGACCTCGAGTGGGCCGTCGCCGAGGGGGCGACGCTCGTGCGCGTCGGCTC
CGCGGTCTTCGGGGCTCGCTGA

Protein sequence :
MLSMPPTAPSDPTPTPSFADALARVHDRIERARTSAGRDDRDGSDGSDDKVRLLLATKTQDADDVRAAVLADRAAGRPGE
VLVGENRVQELTAKAPALADLALTVHLIGALQSNKVNHALRALAQHRQACVETVDSIALAEKIGSRVLTAAAEAGDGSTD
IPLDVYVQVNVSGEESKAGVSPEAAVELALAVAEVDGLRLSGFMTIGARSSDERLVRAGFARLRELRDEVLGSGAPGTSA
ATELSMGMSQDLEWAVAEGATLVRVGSAVFGAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 3e-21 42
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 3e-21 42
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 3e-21 42
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 3e-21 42