Gene Information

Name : Sked_10830 (Sked_10830)
Accession : YP_003313863.1
Strain : Sanguibacter keddieii DSM 10542
Genome accession: NC_013521
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 1262667 - 1262861 bp
Length : 195 bp
Strand : -
Note : PFAM: Helix-turn-helix

DNA sequence :
GTGCTCAACGACGTCCGCGCCCTGCGTGAGGCCGCCGGCCTGTCCCAGGCCGCGCTCGGCACCGTGCTCGGTGTCTCGCG
CCAGACCATCAACTCGATCGAGACCGGGAAGTACGACCCGTCCCTCCCCCTCGCGATCGCCATCGCCCGCCACTTCACCA
CGACAGTCGAGGAGATCTTCCATGTCGACGCCTGA

Protein sequence :
MLNDVRALREAAGLSQAALGTVLGVSRQTINSIETGKYDPSLPLAIAIARHFTTTVEEIFHVDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 3e-10 54
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 8e-10 48
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 6e-10 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sked_10830 YP_003313863.1 transcriptional regulator VFG2175 Protein 2e-10 48
Sked_10830 YP_003313863.1 transcriptional regulator VFG2168 Protein 2e-10 48