Gene Information

Name : Sked_10200 (Sked_10200)
Accession : YP_003313803.1
Strain : Sanguibacter keddieii DSM 10542
Genome accession: NC_013521
Putative virulence/resistance : Unknown
Product : ribonucleoside-diphosphate reductase class Ib subunit alpha
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0209
EC number : -
Position : 1182710 - 1184791 bp
Length : 2082 bp
Strand : +
Note : PFAM: Ribonucleotide reductase N-terminal; Ribonucleotide reductase, barrel domain; Ribonucleotide reductase, all-alpha domain; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit

DNA sequence :
ATGCTCAACCTCTACGGACCGGACGGCGAGATCCAGTTCGACAAGGACCGGCAGGCTGCGCGGCAGTACTTCCTGCAGCA
CGTCAACCAGAACACGGTCTTCTTCCACAGCCTCGAGGAGAAGCTCGAGTACCTCGTCGAGAACAAGTACTACGAGCCCG
AGATCCTCGCGAAGTACACCCCCGCCTTCGTGAAGTCGCTCTTCGACCTCGCGTACTCCAAGAAGTTCCGCTTCGAGACC
TTCCTCGGCGCCTTCAAGTACTACACCTCGTACACGCTCAAGACCTTCGACGGCAAGCGCTACCTCGAGCGCTTCGAAGA
CCGCGTCTGCATGGTGGCCCTGACCCTCGCCGACGGCGACGAGACCACGGCCGTCAACGTCGTCGAGGAGATCATCGCCG
GGCGCTTCCAGCCCGCCACCCCCACCTTCCTCAACTCGGGCAAGGCGCAGCGCGGCGAGGCCGTCTCCTGCTTCCTCCTC
CGCATCGAGGACAACATGGAGTCGATCGCCCGCGGCATCAACTCCGCCCTCCAGCTCTCCAAGCGCGGCGGCGGCGTCGC
CCTCCTGCTCAGCAACATCCGTGAGCACGGCGCACCCATCAAGCACATCGAGAACCAGTCCTCCGGCGTCATCCCCGTGA
TGAAGCTCCTCGAAGACTCCTTCTCCTACGCCAACCAGCTCGGAGCGCGCCAGGGCGCCGGAGCCGTGTACCTGCACGCG
CACCACCCCGACATCATGCGGTTCCTCGACACCAAGCGTGAGAACGCCGACGAGAAGATCCGCATCAAGACGCTCTCGCT
CGGTGTCGTCATCCCCGACATCACCTTCGAGCTCGCCCGCAAGAACGAGGACATGTACCTCTTCTCGCCCTACGACGTCG
AGCGCGTCTACGGCAAGCCCTTCGCCGACGTCGCCATCTCCGAGAAGTACCACGAGATGGTCGACGACGGACGCATCCGC
AAGACGAAGATCAAGGCCCGCGAGTTCTTCCAGACCCTCGCCGAGCTCCAGTTCGAGTCCGGCTACCCGTACGTCATGTT
CGAGGACACCGTCAACGCGGCCAACCCCATCAAGGGCCGCATCACGCACTCGAACCTCTGCTCCGAGATCCTCCAGGTCT
CGACCCCGTCGACCTACAACGACGACCTCTCGTACGAGCACATCGGGCGCGACATCTCCTGCAACCTCGGCTCCATGAAC
ATCGCCAAGGCCATGGACTCGCCCGACTTCGCCAAGACCATCGACACCGCGATCCGTGCCCTCACCGCCGTCTCCGACCA
GACGAGCATCGACTCCGTCCCGTCGATCCGACGCGCCAACGAGTCCGGCCACGCCATCGGCCTCGGCCAGATGAACCTCC
ACGGCTACCTCGCACGCGAGCGGGTGTTCTACGGCTCCGAAGAGGGCATCGACTTCACCAACATCTACTTCTACACGGTC
GCCTTCCACGCGATCGCAGCGTCCAACCGCCTCGCCATCGAGCGCAAGCGCTTCTTCGGCGGGTTCGAGGACTCCAAGTA
CGCCACCGGCGAGTACTTCGACAAGTACACCGACCAGGTGTGGGAGCCCGCCACCGACCGCGTCCGCCAGATCTTCGCCG
ACGCCGGCGTGCACATCCCCACCCAGCAGGACTGGGCCGAGCTCAAGGCATCCGTCATGGAGCACGGCATCTACAACCAG
AACCTCCAGGCCGTGCCGCCGACCGGTTCCATCAGCTACATCAACAACTCGACCTCCTCGATCCACCCCGTGGCCTCGAA
GATCGAGATCCGCAAGGAAGGCAAGATCGGGCGCGTCTACTACCCGGCGCCGTACCTCACCAACGACAACCTGGAGTACT
ACCAGGACGCGTACGAGATCGGCTACGAGAAGATCATCGACACCTACGCCGCGGCCACGCAGCACGTCGACCAGGGACTC
TCGCTCACGCTGTTCTTCAAGGACACCGCGACCACGCGTGACGTCAACCGCGCGCAGATCTACGCGTGGCGCAAGGGGAT
CAAGACGCTGTACTACATCCGGTTGCGTCAGCTGGCGCTGGAGGGGACCGAGGTCGAGGGTTGCGTCTCCTGCATGCTGT
GA

Protein sequence :
MLNLYGPDGEIQFDKDRQAARQYFLQHVNQNTVFFHSLEEKLEYLVENKYYEPEILAKYTPAFVKSLFDLAYSKKFRFET
FLGAFKYYTSYTLKTFDGKRYLERFEDRVCMVALTLADGDETTAVNVVEEIIAGRFQPATPTFLNSGKAQRGEAVSCFLL
RIEDNMESIARGINSALQLSKRGGGVALLLSNIREHGAPIKHIENQSSGVIPVMKLLEDSFSYANQLGARQGAGAVYLHA
HHPDIMRFLDTKRENADEKIRIKTLSLGVVIPDITFELARKNEDMYLFSPYDVERVYGKPFADVAISEKYHEMVDDGRIR
KTKIKAREFFQTLAELQFESGYPYVMFEDTVNAANPIKGRITHSNLCSEILQVSTPSTYNDDLSYEHIGRDISCNLGSMN
IAKAMDSPDFAKTIDTAIRALTAVSDQTSIDSVPSIRRANESGHAIGLGQMNLHGYLARERVFYGSEEGIDFTNIYFYTV
AFHAIAASNRLAIERKRFFGGFEDSKYATGEYFDKYTDQVWEPATDRVRQIFADAGVHIPTQQDWAELKASVMEHGIYNQ
NLQAVPPTGSISYINNSTSSIHPVASKIEIRKEGKIGRVYYPAPYLTNDNLEYYQDAYEIGYEKIIDTYAAATQHVDQGL
SLTLFFKDTATTRDVNRAQIYAWRKGIKTLYYIRLRQLALEGTEVEGCVSCML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 0.0 79