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Name : Vpar_0669 (Vpar_0669) Accession : YP_003311632.1 Strain : Veillonella parvula DSM 2008 Genome accession: NC_013520 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 804885 - 806711 bp Length : 1827 bp Strand : + Note : PFAM: polysaccharide biosynthesis protein CapD; 3- beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; UBA/THIF-type NAD/FAD binding protein; short-chain dehydrogenase/reductase SDR; dTDP-4- dehydrorhamnose reductase; NAD-dependent epimera DNA sequence : TTGCGTTCATATTTATTACCATCCATATTGTTTATTACCGATATTGTGACGATTGTAATCGTTGCTTTTATCAGTCTTTT TATTCGATTTGATGGACACATAGAACCTCAATATATTAATCAAATGGTGGATGCACTTCCGTTATTACTTATTTCGTATA TGTTGATGTTCTTGATAATGCATTTATATACACGTATTTGGCGCTATGCAGGGATGCGAGAGGTATTAGCAGTATTTGTA GCGACTACAATTGGTACGGCTTTATTCTATTCCTCTATGTTTGTATTTGGTAAGTCATTACCACGTTCCATCTATTTTAT TACATGGTTCCTCACTACAGGTGCTGTTGGTATGGGACGTATGTTGCTTCATTATGTGGCACTTCACTATAGCAGTGGGG ACGATGGTGAAAGTGGCCAAGTGAATACATTGATCATAGGAGCCGGTGATGCAGGTGCAACTATAGCTCGTGAAATTGAA CGATATCATAAGCGTTCTCGTCGAGTGATTGGTTATGTTGATGATGACATGTTTAAACATAATCGTCTTATGAATGGTTT TAGAATTCTTGGTAATCGTGAAGATATTCCAGCATTAGTTGCTAAGTATAAGGTAGAAGAAATTATTATTGCCATGCCTT CCGTGAAGCGAGATATTATTCAAGAAATCATGGAAATCTGTTCTCCTTTAAAATGTAAAATCAATATTTTACCGGGGATG TATCAATTACTTGATGATGAAGTTCTTGTATCTCATTTACATCCTGTTTCAATCGAGGACTTGTTGGAGCGTGATGAGAT TCAGCTCGATACGTCTAAGGTTGAAACATATCTTAAGGATAAAGTGGTTTTAGTTACTGGTGCGGGGGGCTCTATTGGTT CTGAAATTTGTCGTCAAGTTTTACGTGTAAAACCTAAAAAGCTATTGCTCCTTGGTCATGGTGAAAATAGTATTTATCTT ATTCATCAAGAATTACGTAGTATTGCGCCTGAAGGTACCTTGGTTCCAATCATTGCAGATATTCGTGATAAGAATCAACT AGAGCAAATTTTTAAAAACTATAATCCTGATGTAGTATTTCATGCGGCAGCTCATAAACATGTGCCGCTTATGGAAATCC AGCCAATTGCTGCGGTATTAAATAATATTTATGGTACTCGTAATGTTGCGGATGTAGCCGGAGCTCATGGAGTAGATCGA TTTGTTATGATTTCCACGGATAAAGCGGTGAATCCAACCAGCGTTATGGGCGCTACAAAACGGGTTGCTGAAAAAGTTGT GCTTGGTATGAATCACACATATGATACTAAGTTTATAACAGTTCGTTTTGGTAATGTACTTGGTAGCCGTGGTTCGGTTA TTCCTTTATTTCGTAAACAAATTGAAGCAGGTGCCCCTGTAACCGTTACAGATCCAGAAATGACACGTTATTTCATGACT ATTCCTGAAGCCAGTCAATTAGTACTTCAAGCTGGTGCCATGGGGAATGGAGGCGAAGTGTTTCTTTTAGACATGGGTGA ACCGGTTAAAATTGTCGATTTGGCTAAGAATATGATTCGCCTTTCTGGCTTTGAGCCTAATAAGGATATTCGTATTGAAT TTACTGGATTACGTCCAGGTGAAAAGTTATACGAAGAATTATTGACTGCCGAAGAAGGTACGAATACTACTACGCATAAG AAAATTTTTGAAGCAGCTCTAGAAGATGTTAATCAAGAATGGCTGAGTCGTGAAATAGAGCGCTTTGATACATGTAAAAC CGATATAGATGTAATTAATGTATTGCAGGATATCATTCCTACATACGATCCAAATCATAATGTATAG Protein sequence : MRSYLLPSILFITDIVTIVIVAFISLFIRFDGHIEPQYINQMVDALPLLLISYMLMFLIMHLYTRIWRYAGMREVLAVFV ATTIGTALFYSSMFVFGKSLPRSIYFITWFLTTGAVGMGRMLLHYVALHYSSGDDGESGQVNTLIIGAGDAGATIAREIE RYHKRSRRVIGYVDDDMFKHNRLMNGFRILGNREDIPALVAKYKVEEIIIAMPSVKRDIIQEIMEICSPLKCKINILPGM YQLLDDEVLVSHLHPVSIEDLLERDEIQLDTSKVETYLKDKVVLVTGAGGSIGSEICRQVLRVKPKKLLLLGHGENSIYL IHQELRSIAPEGTLVPIIADIRDKNQLEQIFKNYNPDVVFHAAAHKHVPLMEIQPIAAVLNNIYGTRNVADVAGAHGVDR FVMISTDKAVNPTSVMGATKRVAEKVVLGMNHTYDTKFITVRFGNVLGSRGSVIPLFRKQIEAGAPVTVTDPEMTRYFMT IPEASQLVLQAGAMGNGGEVFLLDMGEPVKIVDLAKNMIRLSGFEPNKDIRIEFTGLRPGEKLYEELLTAEEGTNTTTHK KIFEAALEDVNQEWLSREIERFDTCKTDIDVINVLQDIIPTYDPNHNV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-94 | 49 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 2e-96 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Vpar_0669 | YP_003311632.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 8e-92 | 45 |
| Vpar_0669 | YP_003311632.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 2e-74 | 44 |
