Gene Information

Name : Vpar_0266 (Vpar_0266)
Accession : YP_003311230.1
Strain : Veillonella parvula DSM 2008
Genome accession: NC_013520
Putative virulence/resistance : Unknown
Product : Cys/Met metabolism pyridoxal-phosphate-dependent protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 345348 - 346481 bp
Length : 1134 bp
Strand : +
Note : PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gur:Gura_3858 cystathionine gamma-synthase

DNA sequence :
ATGAAGTTTAATACAAAATGCGTTCATGGCAGTGGTACACCGGATGATACCGGTGCGATTTCCCCTGCAATCTATATGTC
TAGTACGTTCTCTCATCCAAAGTTGGGTGATACAACAGGTTACCAATATTCACGTGAGTCTAATCCAACACGTGACCGCT
TAGAACAATTGATAGCTGGCCTTGAAGAAGGTACAGATGCATTGGCATTTTCCTCTGGTATGGCTGCGGTGGATGCAGTA
TTCCATTTATTTTCTCCAGGAGACCACATCATCTTAGGTGATGACTTGTATGGTGGCTCTATCCGTATGTTCACAAATAT
TTACGAACAAAACGGCATTGAGTTTACTTATGTAGGTACCTCTGATCTTGATGCGGTGAAAGCTGCTTTTAAACCGAATA
CAAAGGCTGTTTATATTGAAACACCGACAAATCCTATGATGGAGATTACCGATATTCGTGCACTCTGTGCATTGGCGCAT
GCACGTAATACGCTAGTAATCATCGACAATACTTTCCTAAGTCCATATTTCCAAAAGCCATTGACCTTGGGTGCCGATAT
TGTCGTTCATAGTGGTACAAAATTCATTGGTGGTCATCACGATGTAATTTCTGGTTTTACTATTGTAAAAGACGAAGAAA
TCGCGGCAAAATTGCGTTTAACGTACAAAACAGTAGGTGCATGCCTATCCGCTATGGATAGCTGGCTCGTTATTCGCGGC
GTAAAAACATTGGCTCTACGCATGGAGCAACATCAAAAGAATGCCATTGCTCTTGCCGAATGGCTAAAAAAACAACCAAA
AGTAACTAAAGTTTTGTTCCCAGGCCTTCCTGAACATCCAGGTTATGAAATCAATAGAGCCCAAACAACAGGCTTTGGCG
GTATGTTATCCTTCGAAGTAGATAGTGAAGAAACGGCTAAACAAGTATTAGAAGGTATTGAGCTTATTCAATTCGCTGAA
AGCCTTGGTGGTACAGAATCCTTGTTGACGTATCCTGTGACGCAAACACATCCTGACTTGAAACCTGAAGATGCAGAACG
CAAAGGTATTACACGTCGTTTGTTACGTTTATCTGTAGGTATTGAAGATACAGAAGACTTGATTGCGGACTTGGAACAGG
CTTTTAACAAATAA

Protein sequence :
MKFNTKCVHGSGTPDDTGAISPAIYMSSTFSHPKLGDTTGYQYSRESNPTRDRLEQLIAGLEEGTDALAFSSGMAAVDAV
FHLFSPGDHIILGDDLYGGSIRMFTNIYEQNGIEFTYVGTSDLDAVKAAFKPNTKAVYIETPTNPMMEITDIRALCALAH
ARNTLVIIDNTFLSPYFQKPLTLGADIVVHSGTKFIGGHHDVISGFTIVKDEEIAAKLRLTYKTVGACLSAMDSWLVIRG
VKTLALRMEQHQKNAIALAEWLKKQPKVTKVLFPGLPEHPGYEINRAQTTGFGGMLSFEVDSEETAKQVLEGIELIQFAE
SLGGTESLLTYPVTQTHPDLKPEDAERKGITRRLLRLSVGIEDTEDLIADLEQAFNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-79 44
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 5e-67 44
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-78 43