Gene Information

Name : Vpar_0258 (Vpar_0258)
Accession : YP_003311223.1
Strain : Veillonella parvula DSM 2008
Genome accession: NC_013520
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1135
EC number : -
Position : 338840 - 339862 bp
Length : 1023 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: yen:YE4181 ABC transporter

DNA sequence :
GTGATTGCTATACGAAATGTAACGAAAGAATTTGACGTTAATAAGCAAAAGGTTACTGCATTATCTGATGTAAACTTTAC
CATAGAAAAAGGGGACATATTTGGCATTATTGGCTTCAGTGGAGCTGGCAAATCCACACTGTTACGAATGATTAATGCTT
TAGAGGTACCTACCTCTGGTCATGTTGAAATAGATGGTGTGAATATCAATGGCTTAAGTTTTAACGAGCTCAGAAAGGTT
CGTAAGCGCATCGGCATGGTATTTCAACAGTTTAATTTATTGAATGCTAAATCTGTGTATGATAATGTGGCTATCCCGCT
AATTCTTAATAGGGTACCAAAATCCGACATTGATAAAAAGGTTAAAACCTTATTAGACTTTGTTGATTTAGGCGATAAAG
CAAATGCATATCCTGGAGAATTATCTGGCGGTCAAAAGCAACGCGTTGGTATTGCCCGTGCATTAGCTACAGATCCATCC
ATATTGCTTTGTGATGAAGCAACTAGCGCTCTAGATCCTGATACAACAGAATCTATATTACAATTATTAGAACGTGTTAA
TCGTGAACTAGGGGTAACAGTAGTTATCGTAACTCATGAGATAGATGTAATTCAGAAAATATGTAATCGTGTTGTAGTTA
TGGAGCATGGAAAGCTCATAGAGAGCGGATCTGTACTTGAGGTGTTTAGTAAACCTAAACACGAAACAACAAAGCGATTT
GTTAGGACTGTAATTCCTGATGAGATTCCATCAACTGTGAAACATACATTAGCTTGTGATAAAAGGCCATACACAATTCT
TAAGATGCATTTCTTAGGAAATAATACGACAGATAATGTTCTATATCATATTAATAAAACCTTTGATTTAGAAACGAGTG
TATTATTTGCTACGGTAACAGAGTTAGAACATACTGTACTTGGTATATTCATTGTTCAGTTTATTGGCGATGATCTTGAG
GTGGGCAAGGTAAAAGAGTATCTTGTTGCTCAAGGTATTGAATGGCAGGAGGTGACACTATAA

Protein sequence :
MIAIRNVTKEFDVNKQKVTALSDVNFTIEKGDIFGIIGFSGAGKSTLLRMINALEVPTSGHVEIDGVNINGLSFNELRKV
RKRIGMVFQQFNLLNAKSVYDNVAIPLILNRVPKSDIDKKVKTLLDFVDLGDKANAYPGELSGGQKQRVGIARALATDPS
ILLCDEATSALDPDTTESILQLLERVNRELGVTVVIVTHEIDVIQKICNRVVVMEHGKLIESGSVLEVFSKPKHETTKRF
VRTVIPDEIPSTVKHTLACDKRPYTILKMHFLGNNTTDNVLYHINKTFDLETSVLFATVTELEHTVLGIFIVQFIGDDLE
VGKVKEYLVAQGIEWQEVTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0419 YP_042546.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 4e-74 45
SAR0461 YP_039910.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 1e-73 45
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 5e-31 41
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 6e-31 41