Gene Information

Name : Vpar_0201 (Vpar_0201)
Accession : YP_003311168.1
Strain : Veillonella parvula DSM 2008
Genome accession: NC_013520
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 271852 - 272583 bp
Length : 732 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bsu:BSU30760 manganese ABC transporter ATP- binding protein

DNA sequence : 
ATGGAATGGGCCGTTGAAGTTGAAGATATGACCGTAGCATATACGACAAAACCCGTATTATGGGACGTAGATATGAAGGT
ACCCATCGGTTCCTTAGCGGCCATTGTCGGCCCTAATGGGGCCGGTAAGTCCACATTATTAAAGGCCATGCTCGGTCTAC
TAACAGTTATCTCAGGAAGTGTAAAATTTTATATCGATCACCACTTAGCGATGGACAAAAACGATTACAAAAAAATCGCC
TACGTCCCTCAAAGTGGCAGCGTAGACTGGGACTTCCCTACCACAGTACTAGATGTAGTACTCATGGGCCGTTATGGTCA
TCTAGGTTGGTTTAAGCGTCCTAGCAAAAAGGATAAGGAACTCGCCCTCTCCATGATTGAAAAAATGGGTATGAGCGACT
ATGTGGACAGACAAATTCGCCAGCTTTCAGGGGGACAACAACAACGCGTCTTCCTCGCAAGAGCCCTCGTCCAAGAGGCA
GATATTTACCTCATGGACGAACCATTCAAGGGCGTCGATAAAACTACAGAGCATGCTATTATTTCGCTTTTACAAGAAAT
GAAAGCTCGAGGCAAAACGGTTATCGTCGTCCACCACGATTTAAATACGGTGCCCCAATATTTCGATTGGGTAACGATGG
TAAACAAACAAACTGTCGCCTATGGCCCCGTAGCAGATACATTTACGGACGAAGCTATTGAGCGCACCTACGGCAAGGGG
AGGATTGTATGA

Protein sequence : 
MEWAVEVEDMTVAYTTKPVLWDVDMKVPIGSLAAIVGPNGAGKSTLLKAMLGLLTVISGSVKFYIDHHLAMDKNDYKKIA
YVPQSGSVDWDFPTTVLDVVLMGRYGHLGWFKRPSKKDKELALSMIEKMGMSDYVDRQIRQLSGGQQQRVFLARALVQEA
DIYLMDEPFKGVDKTTEHAIISLLQEMKARGKTVIVVHHDLNTVPQYFDWVTMVNKQTVAYGPVADTFTDEAIERTYGKG
RIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-49 44
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 3e-49 44
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 4e-49 44
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-48 43
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-48 43
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 3e-41 42
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 4e-41 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Vpar_0201 YP_003311168.1 ABC transporter BAC0400 Protein 5e-71 59
Vpar_0201 YP_003311168.1 ABC transporter BAC0350 Protein 2e-49 44
Vpar_0201 YP_003311168.1 ABC transporter BAC0440 Protein 9e-47 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Vpar_0201 YP_003311168.1 ABC transporter VFG0526 Protein 2e-49 44