Gene Information

Name : Vpar_1405 (Vpar_1405)
Accession : YP_003312363.1
Strain : Veillonella parvula DSM 2008
Genome accession: NC_013520
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 1618047 - 1619795 bp
Length : 1749 bp
Strand : -
Note : TIGRFAM: pyruvate kinase; PFAM: pyruvate kinase barrel; PEP-utilising protein mobile region; pyruvate kinase alpha/beta; KEGG: bha:BH3163 pyruvate kinase

DNA sequence :
ATGAAACGTACAAAAATTGTATGTACTGTAGGTCCAGGAACGGATAAATTTGGCATCTTAGAAGATATGATGCGGGCGGG
CATGAACGTAGCTCGTTTTAACTTTTCCCACGGATCCCATGAAGAGCAAGCAGAACGCATGCAAATGGTGCGCGATGCGG
CGATGATTGTGAATAAACCAATCGCATTAATGCTCGATACAAAAGGTCCAGAGGTACGTCTTGGTCTATTTAAAAAGGGC
AAGGTATTTCTCGAAGCCGGTCAACAATTTACGTTGACTACAGATGATGTGGAAGGTACAAAAGAGCTTAGCTCCGTGAA
CTACAAAGGTCTTACAGGCGATGTGTCCGTAGGGGATAAAGTCCTCTTGGCTGATGGGCTTGTAACACTTATTATTGATG
CTATCGAAGGTAATAATATCGTTACAACTGTTCAAAACAGCGGGGAAATCGGTAACCGCAAGCGTGTAGCCGTACCAGGC
GTAGCCCTAAGCTTGCCACCCGTATCTGAACAGGATGAAGCAGACTTGCGCTTTGGTTGTCAACAAGGGGTAGACTTTGT
GGCCGCATCCTTTATGCAACGCGGTAAAGACATTGTAGCTATTCGCCGTATTCTTGAGTCTGAGAAAAAAGATATCAAGA
TTATCGCAAAAATTGAAAATGCAGAAGGCGTTAAAAATATTGATGAAATCTTGGAAGTAGCTGACGGTCTCATGGTTGCT
CGTGGCGATCTCGGCGTAGAAATTCCTGCAGAAGAGGTGCCAGTACTTCAAAAGATGATGATTGAAAAATGTAATGACTT
GGGGAAACCCGTTATTACGGCGACACAAATGCTCGAGTCTATGATTCAAAACCCACGTCCTACACGTGCGGAAGCAAGTG
ACGTAGCCAACGCCATTTTGGATGGTACTGATGCGATTATGTTGTCTGGTGAAACAGCCAATGGTTCCTATCCTGTAGAA
GCTGTTGCGACCATGACTCGTATTGCAGAGGTAACGGAGAAGGCTGCTATTTACGATAGTTATAGTCGCGCTCGTGAGGA
TGAAGAAATGACTACCACAAGCGCTGTATGCTTGGCTAGCGTGCGCGTAGCTCAAAACCTCGGGGCCACAGCTATTTTGA
CATGTACTGAATCTGGTCACACCGCACTTAGTGTGGCTCGTCATCGTCCAGATTGTAAAATCATCGCTGTCACACCTCAC
GAGGAAACTATCCGTCGCATGCAATTATGCTGGGGTGTAGAGGCTATCAAGGGACATGAAATCATCAACTCCGATGAAAT
GGTTAAACAAGCTATTACCGGTGCTCTCGGCACTGGCGCCATCGAGTCTGGTGACCTCGTAGTTGTTACCGCTGGGGTAC
CATCTGGTGCAACAGGTACGACCAATATGATTCGCGTTCACATTGCAGGTCGAGTACTCTTGTCTGGTAATGGTATATTA
CGTAAATCCGTTACAGGTAATGTGTATATTGCTGCTAATCATAAGGGCAATTATGAAAGCTTCAAAGACGGCGATGTCCT
CGTGGTAGGTACAATGGAGCCTGAATTGATGGCCATTGCCAAACGCGCTGGCGGTATCATCGCAGTGGAAGATGGTTATA
CATCGGACAGTGCTATCGCGGGCATTACGTATGGTATTCCTGTTATCTTAGGCGCTAAAAATGCCCACGAAGTGCTCCTC
GAAGGTCAAGAAGTGACTATCGATGGAGAACGTGGTAAGGTATTTGCGGGCATTGCCAATGCTCGATAA

Protein sequence :
MKRTKIVCTVGPGTDKFGILEDMMRAGMNVARFNFSHGSHEEQAERMQMVRDAAMIVNKPIALMLDTKGPEVRLGLFKKG
KVFLEAGQQFTLTTDDVEGTKELSSVNYKGLTGDVSVGDKVLLADGLVTLIIDAIEGNNIVTTVQNSGEIGNRKRVAVPG
VALSLPPVSEQDEADLRFGCQQGVDFVAASFMQRGKDIVAIRRILESEKKDIKIIAKIENAEGVKNIDEILEVADGLMVA
RGDLGVEIPAEEVPVLQKMMIEKCNDLGKPVITATQMLESMIQNPRPTRAEASDVANAILDGTDAIMLSGETANGSYPVE
AVATMTRIAEVTEKAAIYDSYSRAREDEEMTTTSAVCLASVRVAQNLGATAILTCTESGHTALSVARHRPDCKIIAVTPH
EETIRRMQLCWGVEAIKGHEIINSDEMVKQAITGALGTGAIESGDLVVVTAGVPSGATGTTNMIRVHIAGRVLLSGNGIL
RKSVTGNVYIAANHKGNYESFKDGDVLVVGTMEPELMAIAKRAGGIIAVEDGYTSDSAIAGITYGIPVILGAKNAHEVLL
EGQEVTIDGERGKVFAGIANAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 9e-92 50
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 5e-92 50
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 5e-92 50
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 3e-91 50
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 3e-59 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Vpar_1405 YP_003312363.1 pyruvate kinase VFG0479 Protein 2e-92 50