Gene Information

Name : Vpar_1382 (Vpar_1382)
Accession : YP_003312340.1
Strain : Veillonella parvula DSM 2008
Genome accession: NC_013520
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1588242 - 1589726 bp
Length : 1485 bp
Strand : -
Note : PFAM: aldehyde dehydrogenase; KEGG: dds:Ddes_1981 aldehyde dehydrogenase

DNA sequence :
ATGAGCTTGAACCTTAAAGAAAGATATGGACTTTTAATTAATAATGAATGGGTAAAGGCATCTGACGGTGCTGAATTTAA
AGTATATAACCCTGCTAATGGCGAACAACTCGCTATCTGTGCAGAGGCTACATATGGCGATGTTGATAAAGCTGTAGAGG
CTGCAACAGAAGCTTTCAAAACGTGGAAAAACGTTTCTCAAGTAGAACGTGCTGATTATTTATTGAAAATTGCGGATGCT
ATCGATACTCACAAAGAACATTTGGCACAAGTTGAAACATACGACAATGGTAAGCCAATCCGTGAAACATTGAACGTGGA
TATTCCACTTGGGGCGGACCATTTCCGTTACTTTGCAGGCGTGCTTCGTTCCGAAGAAGGCTCTGCACAAGTATTTGACG
AAAATACATTGAGTCTCATCGTTCGTGAACCGATTGGCGTTGTAGGTCAAGTTGTGCCTTGGAACTTCCCATTCCTAATG
GCCGCTTGGAAATTGGCTCCAGCTCTTGCAGCAGGCTGTACAGTTGTTATCAAACCTTCTAGCCACACATCTCTTAGCTT
ATTAGAACTTGGCGATATTTTGAAAGAAATCTTGCCACCAGGTGTTGTAAACATCGTAACTGGTAAAGGTTCTAAATCCG
GTCAATATATCCTTGATCATCCTGGTTTTAGCAAACTTGCTTTCACAGGCTCTACAGAGGTAGGTCTAGATGTATATAAA
GCAGCATCTGAACGCTTGATTCCTGCCACATTGGAATTAGGTGGTAAATCTGCGAATATCTTCTTTGAAGATGCGAACTG
GAAACAAGCTCTTGACGGGGCAATGCTCGGTATTCTTTTTAACCAAGGTCAAGTATGCTGCGCTGGTTCCCGTATCTTCG
TACAAGATACAATTTACGATAAATTCGTAGCTGAACTTGCTGCACTATTCGATAAGGTGAAAGTTGGTTTGCCTTGGGAT
TCATCTACTCAACTTGGCTCCTTGATTTACGAAGACCAAGTTAATAAAGTATTGAGTTATGTAGACCTTGCAAAAGAAGA
AGGAGCTCGCATTGTAGCCGGTGGTGTACGTGTTACTGATGGCGAACTTGGTAAAGGTTGCTTTGTAAGACCTACACTTA
TTGTAGATGCTACAAATGATATGCGTGTAGCTCGCGAAGAAATCTTCGGCCCTGTAGCTGTTGTCATCAAATTCCACAGC
GAAGAAGAAGTTATTGAACAAGCAAATGACAGCTTATACGGCCTTGGCGGTGGCGTATTTACTCAAAACATCAACCGTGC
TATCCGCGTAGCTCGCGGTATCGAAACAGGGCGTATGTGGGTAAATACATACAATTCAATCCCTGCAGGCGCTCCATTTG
GCGGCTATAAACAATCCGGTATCGGTCGTGAAACTCACAAAGTTATCCTTGAGCACTACACTCAAATGAAAAACATCATC
GTAAACTTGAGCGATAAACCATCTGGGTTCTACGACTTAGATTAA

Protein sequence :
MSLNLKERYGLLINNEWVKASDGAEFKVYNPANGEQLAICAEATYGDVDKAVEAATEAFKTWKNVSQVERADYLLKIADA
IDTHKEHLAQVETYDNGKPIRETLNVDIPLGADHFRYFAGVLRSEEGSAQVFDENTLSLIVREPIGVVGQVVPWNFPFLM
AAWKLAPALAAGCTVVIKPSSHTSLSLLELGDILKEILPPGVVNIVTGKGSKSGQYILDHPGFSKLAFTGSTEVGLDVYK
AASERLIPATLELGGKSANIFFEDANWKQALDGAMLGILFNQGQVCCAGSRIFVQDTIYDKFVAELAALFDKVKVGLPWD
SSTQLGSLIYEDQVNKVLSYVDLAKEEGARIVAGGVRVTDGELGKGCFVRPTLIVDATNDMRVAREEIFGPVAVVIKFHS
EEEVIEQANDSLYGLGGGVFTQNINRAIRVARGIETGRMWVNTYNSIPAGAPFGGYKQSGIGRETHKVILEHYTQMKNII
VNLSDKPSGFYDLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-98 49
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-101 48
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-101 48
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-101 48
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-101 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Vpar_1382 YP_003312340.1 aldehyde dehydrogenase VFG0082 Protein 3e-98 49