Gene Information

Name : Vpar_1137 (Vpar_1137)
Accession : YP_003312098.1
Strain : Veillonella parvula DSM 2008
Genome accession: NC_013520
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1301865 - 1302647 bp
Length : 783 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bsu:BSU33290 ferrichrome ABC transporter ATP- binding protein

DNA sequence : 
ATGAATACCGCTATTGATGTAAAACAGTTATCCGTAACTCTTGGCAATCGTCATATTCTACATGACATTAATGTATCGGT
TCCTATCGGTAAAATTACGACATTAATAGGGCCTAATGGCTGTGGTAAAAGTACGCTTTTACGATCTATGATCGGATATA
TTTATAGCCCTCATGAATGTATTACCATATTTGATAAACCGTTACAATCATATTCTCAAAACAATCTGGCACGGCAAATG
GCATTTTTGCCACAAGTACCGAATATGCCAAAGGATATGACTGTAGAAGAATTGGTATATTGTGGACGGTATCCATACCA
AACATGGTGGAAAAACACGGCTAAAGAAGATCGTGAGATTGTTGACTATGCGTTACATATCACGAAAACGAATCATTTGC
GAGAACAATTAATCCCATCCCTATCTGGTGGTGAACGGCAACGCGTTTGGATTGCTATGGCGCTAGCACAGCAACCAAAA
TTATTAGTCTTAGACGAACCAACAACATATTTAGATATTAATCACCAATTAGAAATTATGGAGTTATTGAAACGATTAAA
TAAGGAACAAGATTTAACCGTTCTCATGGTACTTCACGAACTAACACAGGCGGTTCAATATTCACATTATATGGCTGTTA
TAAAAGAAGGCCATTTAGTAGCATCAGGAGAGACAAGTAAAATTATATCGGATGAGTTGTTTAGAGATGTATTCTCTGTA
GATGTACAACTTGATACATTTGATAATAAAAAATATGTGCGCGTAATAGGATTAGTTGAGTAG

Protein sequence : 
MNTAIDVKQLSVTLGNRHILHDINVSVPIGKITTLIGPNGCGKSTLLRSMIGYIYSPHECITIFDKPLQSYSQNNLARQM
AFLPQVPNMPKDMTVEELVYCGRYPYQTWWKNTAKEDREIVDYALHITKTNHLREQLIPSLSGGERQRVWIAMALAQQPK
LLVLDEPTTYLDINHQLEIMELLKRLNKEQDLTVLMVLHELTQAVQYSHYMAVIKEGHLVASGETSKIISDELFRDVFSV
DVQLDTFDNKKYVRVIGLVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-48 43
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-44 43
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-44 43
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-44 43
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-44 43
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-42 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-45 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-45 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-45 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-45 42
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 5e-47 41
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 5e-47 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Vpar_1137 YP_003312098.1 ABC transporter BAC0164 Protein 7e-43 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Vpar_1137 YP_003312098.1 ABC transporter VFG1042 Protein 6e-43 42
Vpar_1137 YP_003312098.1 ABC transporter VFG0925 Protein 4e-44 42