Gene Information

Name : Vpar_1071 (Vpar_1071)
Accession : YP_003312032.1
Strain : Veillonella parvula DSM 2008
Genome accession: NC_013520
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1239146 - 1239868 bp
Length : 723 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bcy:Bcer98_3786 ABC transporter-related protein

DNA sequence : 
ATGAACCAAACAGTAATTGACATACAAGGAATTACAAAAACCTATGTGAATGGCAAATTATCAGTACCTGTTCTACATGG
CATTGATTTAGTTGTCAATAAGGGTGAATTTGTATCCATTATGGGACCATCTGGCTCAGGTAAATCAACCTTTATGAATA
TTCTCGGATGTTTGGACCGACCTACAACTGGTTCTTATCGACTCAATGGAGACGAGGTTGCTACCTTATCTGATGATGAG
CTTGCGTATGTGCGTAATAAACAGATCGGTTTTGTATTTCAAAGCTTTAATTTGTTGACAAAATTAACAGCCCTAGAAAA
TGTAGCGCTTCCTATGATTTATGCAGGTGTAAATAAAAAGATGCGCATTGAACGAGCTTCTCAATTATTACAGTCTGTCG
GATTAGACGAGCGTATGGATCACTTGCCATCCGAGTTGTCTGGGGGGCAACGACAACGTGTAGCGATTGCTCGTGCATTG
GCGAATAATCCTGCTATTATTATGGCTGATGAACCGACAGGGAATCTCGACTCTAAGTCAACCATTGATGTTATGAATAT
ATTTAGAGGTCTTCACGATGAAGGACGTACAATTCTTCTAGTTACACATGAACCTGATATTGCTACGTATGCGAGTCGTA
ATGTAGTCTTGAAAGATGGGATAATCGTAGAGGATTCGTTCAATTCTAATATGACTCCTATAAAGGAGGTGCCTAATGTA
TAA

Protein sequence : 
MNQTVIDIQGITKTYVNGKLSVPVLHGIDLVVNKGEFVSIMGPSGSGKSTFMNILGCLDRPTTGSYRLNGDEVATLSDDE
LAYVRNKQIGFVFQSFNLLTKLTALENVALPMIYAGVNKKMRIERASQLLQSVGLDERMDHLPSELSGGQRQRVAIARAL
ANNPAIIMADEPTGNLDSKSTIDVMNIFRGLHDEGRTILLVTHEPDIATYASRNVVLKDGIIVEDSFNSNMTPIKEVPNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-35 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Vpar_1071 YP_003312032.1 ABC transporter NC_012469.1.7686878. Protein 2e-62 60
Vpar_1071 YP_003312032.1 ABC transporter NC_008702.1.4606598. Protein 5e-48 50
Vpar_1071 YP_003312032.1 ABC transporter CP001581.1.gene798.p Protein 2e-40 42