Gene Information

Name : Vpar_1021 (Vpar_1021)
Accession : YP_003311982.1
Strain : Veillonella parvula DSM 2008
Genome accession: NC_013520
Putative virulence/resistance : Virulence
Product : ATPase AAA
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1183511 - 1185958 bp
Length : 2448 bp
Strand : -
Note : PFAM: ATPase AAA; ATPase AAA central domain protein; UvrB/UvrC protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: ATPase AAA; KEGG: bsu:BSU00860 class III stress response- related ATPase

DNA sequence :
ATGATGCAACGGTTTACAGACGATGCACAGCGTGTTCTTTCGTTAGCTCAAGAGGCTGCTTTGGAGTTAGGACATGACTA
TGTCGGTACTGAACACGTACTCATCGGCCTTACAAAGGTTAAAAATGGTGTAGCAGCTAAAGCTTTAGAAGAGCTTGGCC
TTGTTACAGAAGATATTTTTGAAGCTGTAGAAGAACATGTAGGACGTGGTAATAAAAAGGCAACATCAATATATATGACA
CCTCGCGTTAAACATGTACTTGAGCTTGCCATTCAAGTAGCAAATCACATGAATCACAATTACGTTGGTACTGAGCATAT
TCTATTGGGCCTACTTAGCGATGGTAGCGGTGTTGCAGTTGCTATTTTACGAGCTATGAATATACGTAGTAATGACGTAG
TAGAAGCAATTCGTAGTATTCTTGGCTCGAATAAAGGTAGCAATAATGGTGGTCAAGAGGGAATAAATAGCAATAATGAT
TTAGGTGAGCTGTCAGATTTTGCAACTGACCTTAATGAGTCTGCTAAACAAGGTAAGATTGATCCCGTTATTGGTCGCGA
TACGGAGATTCAACGAGTCATTCAAATTCTCAGTCGTAGAACTAAAAATAATCCTGTTCTTATCGGTGAACCAGGTGTAG
GTAAAACAGCTATTGCCGAAGGCTTGGCACAGCGCATTGTGACTGGTAATGTACCGGAGATTTTGCGTAATAAACGCATT
ATATCTCTTAGTATTGGCTCTATGTTAGCGGGTGCTAAGTACCGTGGTGAATTTGAAGAACGGTTAAAAAAAGCTATCGA
TGAAGTACAACAACATGATGATATGATTATCTTTATAGATGAAATTCATACATTGGTTGGGGCAGGTGCTACTGAAGGTG
CTATGGATGCAGCTAATATCTTAAAGCCAGCTTTGGCACGAGGTGAATTCCAAGTTATCGGTGCCACAACACTTGATGAA
TATAAGAAACATATAGAAAAAGATGCTGCTTTAGAGCGTCGTTTTCAACCCGTTCAAGTAGGAGAGCCTAACGAAGAGGA
TGCTCTTGAAATTTTAAAGGGCTTAAGAGATCGGTATGAAGCTTTCCATAAGGCTAAGATTACAGATGAGGCATTAACAG
CAGCTGTGTCTTTATCTAGCCGATATATTACAGATCGATTCTTGCCTGATAAGGCTATCGATGTAGTCGATGAAGCTGCA
TCTAAGGTTCGTATGAAAGTATTTTCTGCAGCACCTGATGTTAAAGCATTAGAGGATCGCCTCAATACAGTTAAGAAAGA
AAAAGAAGCGGCTGTTACGTCTCAAGATTTCGAAAAGGCTGCAAAGCTTCGCGATGAAGAACAATCACTAGTAAAAGAAA
TTGGTGATAAAAAATCTATCGCTAAAGAAAAAAGTGATCAAAAGTTAATAGTAACAGAGGAAGACATAGCTGCTGTAGTA
GCACAATGGACAGGCATTCCAGTGGCTAAAATTGCAGAAGAAGAGTCTGCAACCTTACTACATTTAGAAGAAGAACTTCA
TAAACGCGTAGTAGGTCAAGATGAGGCTGTTACTGCTGTAGCTAAAGCTGTACGCCGTGCAAGGGCTGGATTAAAAGACC
CAAAACGGCCTATTGGTTCATTCTTGTTCCTTGGGCCAACTGGTGTAGGGAAAACTGAGCTAGCAAGAGCGCTTGCATCC
TCCTTGTTCGGCGATGAATCTGCTATGATTCGACTTGATATGTCTGAATATATGGAAAAACATACTGTGTCTCGCTTAGT
CGGTGCCCCTCCAGGTTATGTAGGCTATGAAGAAGGTGGCCAATTAACAGATGCGGTACGTCGTAAACCATATAGCGTTA
TCCTCCTCGATGAAGTGGAAAAGGCACATGCAGATTTCTTTAATATTTTGTTACAAGTTCTTGATGATGGTCGTCTTACT
GATAGTCAAGGAAGAACTGTAGATTTCAGAAATACAGTTATTATTATGACAAGTAACTTAGGTGCTAAAGCTTTACATAA
AAACTCTCCAGAACTTGGTTTCTTAGCAGCTAAAAAGGCTGATTCTAATGTTGATGAAAATAAAGGAATTGATTTTAAAG
AGGCTAAGAAGTCGGTAATGGATGCGGTAAAACGTTATTTTAGACCTGAGTTTTTAAACCGCATCGATGAAATGATTGTA
TTCCATCCATTAACTGAAGAGGACTTAAAAGAAATTGTAACTATCTTGATGAGTGATGTTACAAAACGTCTTGAAGAGCG
TGATTTACAATTAGAAATCTCTCCTGAGGCTATGAAATTACTCGTTAAGGAAGGCTCTGATTTTACGATGGGGGCTCGAC
CATTAAAACGTGCTATTCAACGTTTAATTGAGGACCCAGTGTCGGATCTTATTTTGAAAGGAGATGCAAAAGAAGGCAAA
ATTATTAAAGCAGATGCAAAGGATAATGATCTTGTTGTATCAATATGA

Protein sequence :
MMQRFTDDAQRVLSLAQEAALELGHDYVGTEHVLIGLTKVKNGVAAKALEELGLVTEDIFEAVEEHVGRGNKKATSIYMT
PRVKHVLELAIQVANHMNHNYVGTEHILLGLLSDGSGVAVAILRAMNIRSNDVVEAIRSILGSNKGSNNGGQEGINSNND
LGELSDFATDLNESAKQGKIDPVIGRDTEIQRVIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVTGNVPEILRNKRI
ISLSIGSMLAGAKYRGEFEERLKKAIDEVQQHDDMIIFIDEIHTLVGAGATEGAMDAANILKPALARGEFQVIGATTLDE
YKKHIEKDAALERRFQPVQVGEPNEEDALEILKGLRDRYEAFHKAKITDEALTAAVSLSSRYITDRFLPDKAIDVVDEAA
SKVRMKVFSAAPDVKALEDRLNTVKKEKEAAVTSQDFEKAAKLRDEEQSLVKEIGDKKSIAKEKSDQKLIVTEEDIAAVV
AQWTGIPVAKIAEEESATLLHLEEELHKRVVGQDEAVTAVAKAVRRARAGLKDPKRPIGSFLFLGPTGVGKTELARALAS
SLFGDESAMIRLDMSEYMEKHTVSRLVGAPPGYVGYEEGGQLTDAVRRKPYSVILLDEVEKAHADFFNILLQVLDDGRLT
DSQGRTVDFRNTVIIMTSNLGAKALHKNSPELGFLAAKKADSNVDENKGIDFKEAKKSVMDAVKRYFRPEFLNRIDEMIV
FHPLTEEDLKEIVTILMSDVTKRLEERDLQLEISPEAMKLLVKEGSDFTMGARPLKRAIQRLIEDPVSDLILKGDAKEGK
IIKADAKDNDLVVSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Vpar_1021 YP_003311982.1 ATPase AAA VFG0079 Protein 0.0 59
Vpar_1021 YP_003311982.1 ATPase AAA VFG0080 Protein 1e-156 51