Gene Information

Name : Sterm_0528 (Sterm_0528)
Accession : YP_003307333.1
Strain : Sebaldella termitidis ATCC 33386
Genome accession: NC_013517
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 580421 - 581113 bp
Length : 693 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gme:Gmet_3383 two component transcriptional regulator

DNA sequence : 
ATGAAAATACTTATAGTAGAAGACGAGATTATGATTGCAGAGGCTGTTGCACAGGTTCTCAGAAAAAATAATTACAGTGT
TGACATAGCAGCTGACGGGGAAGATGGTCTGGATTGTGCTTTATCAGGAATATATGATGCAGTGATTCTTGATATAATGC
TTCCCAAAAGAGACGGTCTTAGTGTACTGAAATTATTAAGAGAGTCTAAGATACCTGTTCCTGTCATTTTACTGACTGCC
AAAAGCCAGACAGAAGACAAGGTACAGGGTCTGGATTTCGGAGCAGATGATTATCTGGAAAAGCCTTTTCAAATGGAGGA
GCTTTTAGCAAGACTAAGAGCATTAACGAGAAGAAAAGGAGAACTGATTTTTGACGGAATCATGAAATTCGGGGATATAA
GTCTGAATCCTCATCTGCTGCTGCTTTCCTGCCGGGATAATAAAATAAACCTTACATTAAAGGAATCACAGGCTTTGGAA
TTACTTATTACAAATAAAAATACTGCTGTTTCTAAAGAAACTATCATAGAAAAATTATGGGGCTATGACTCTGAAGCAGA
AGATAATCATGCAGAAATTCATATATCCTTATTACGCAAAAAACTGAAGCAGGCAGGCAGCGTGCTTTTAATAAAGGCAA
TCAGAGGAATAGGATATATTATAAAATACCCGGAGGAGGAATCAGCTTGCTGA

Protein sequence : 
MKILIVEDEIMIAEAVAQVLRKNNYSVDIAADGEDGLDCALSGIYDAVILDIMLPKRDGLSVLKLLRESKIPVPVILLTA
KSQTEDKVQGLDFGADDYLEKPFQMEELLARLRALTRRKGELIFDGIMKFGDISLNPHLLLLSCRDNKINLTLKESQALE
LLITNKNTAVSKETIIEKLWGYDSEAEDNHAEIHISLLRKKLKQAGSVLLIKAIRGIGYIIKYPEEESAC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sterm_0528 YP_003307333.1 two component transcriptional regulator, winged helix family NC_007793.3914065.p0 Protein 1e-32 44
Sterm_0528 YP_003307333.1 two component transcriptional regulator, winged helix family NC_002758.1121390.p0 Protein 1e-32 44
Sterm_0528 YP_003307333.1 two component transcriptional regulator, winged helix family NC_010079.5776364.p0 Protein 1e-32 44
Sterm_0528 YP_003307333.1 two component transcriptional regulator, winged helix family NC_002952.2859858.p0 Protein 1e-32 44
Sterm_0528 YP_003307333.1 two component transcriptional regulator, winged helix family NC_007622.3794948.p0 Protein 1e-32 44
Sterm_0528 YP_003307333.1 two component transcriptional regulator, winged helix family NC_003923.1003417.p0 Protein 1e-32 44
Sterm_0528 YP_003307333.1 two component transcriptional regulator, winged helix family NC_013450.8614146.p0 Protein 1e-32 44
Sterm_0528 YP_003307333.1 two component transcriptional regulator, winged helix family NC_002951.3238224.p0 Protein 1e-32 44
Sterm_0528 YP_003307333.1 two component transcriptional regulator, winged helix family AE015929.1.gene1106. Protein 3e-28 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sterm_0528 YP_003307333.1 two component transcriptional regulator, winged helix family VFG0596 Protein 8e-24 41