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Name : Sterm_3940 (Sterm_3940) Accession : YP_003310704.1 Strain : Sebaldella termitidis ATCC 33386 Genome accession: NC_013517 Putative virulence/resistance : Unknown Product : RNA binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 4183498 - 4185663 bp Length : 2166 bp Strand : - Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; RNA binding S1 domain protein; KEGG: pca:Pcar_0908 transcriptional accessory protein DNA sequence : TTGGATATTTTGAAAGCTGCTGCAAATGAAATGGGCCTGAAAGTAGTACAGGTAGAAAGCACAATGAATCTTTATGACGA AGGAGCTACTGTACCTTTTATTGCACGTTACAGAAAAGAAGTTACCGGGAATCTTGATGAGGAGAAAATCAGAGAACTCA TAGAAAAAGTATCATACTACAGAAACCTTGAGAAAAGAAAAGAAGAAGTACTGAGATTAATCGAGGAACAGGGAAAACTA ACCGAGGAACTGAAAACAAGCATAATAAATGCAGTGAAGTTACAGGAAGTAGAAGATCTCTATCTCCCATACAAAAAAAA GAAAAAAACAAAAGCAGACGTAGCTGCAGAAAATGGACTGGAGCCCCTGTCTTTATTTTTGATGGATAAAAATGTAAATA TGGAAGCATTGAAAAAAGAGGCGGAAAAATATATAAATGAACAGGTTCCGGGAATTGATGAAGCTATTGAGGGAGCAAAG CTGATTATAGCGCAGAATATTTCCGAAAATGCCAAATACAGAGAATCTATACGTGACAGAATCAGCAAATACGGAGTGCT GACTTCAAAGGTGATAGAAAAAAACAAAGTAAATGATGTAAAAGGTGTCTATCAGGATTACTATAAATATTCCGAACCTT TGACACGGGCAGCTTCACACAGGATTCTTGCCTTAAACAGAGGTGAAAACGAGAAAATATTAAAAGTAGATATAGAAATA GATGAAACTACACATAAATATATAGTAGATAATATTTTAAGAGGATTTCAAAATAAAAATCTTACGGAATTTTTTACAGA GGTTATAGAAGATTCACTCAGCAGACTGGTTTACCCGTCTATAAAAAATGAAGTAAGAAATATATATACAGAAAAATCAG AAGTAGAAGCAATAGATATATTTAAGGATAATCTGGAAAAATTATTATTACAGCCTCCACTGTATAAGAAAGCTATAATG GGACTGGATCCCGGCTACAGAACAGGGTGTAAGCTTGTAGTCATTAATAAAGACGGCTTCTATGAAAAAGATGATGTAGT GTTTCTTGTGGAGGAGATGCATTCTCCAAGACAGGTAAGCGAAGCTAAAAAGAAAATATTACAGTATATAGAAGATTATG ACGTGGATATAATAGCAATAGGAAACGGAACTGCTTCAAGAGAAACGGAAAGCTTTGTTGCCAAAGTGATAAAGGAATCT AAAAAGAAGGTATTTTATCTTATTGTAAATGAAGCGGGAGCTTCTGTATATTCTGCTTCAAAGCTTGCAAAAGAGGAATT TCCCGATTTAGATGTAACAGCAAGAGGAGCTGTTTCGATAGCAAGAAGAATTCAGGATCCTATGGCGGAGCTGGTAAAAA TAGATCCGAAGTCAATAGGCGTAGGAATGTACCAGCATGATGTAAACCAGAAGACACTGAATGAATCGCTGGAGCAGACA ATAGAACATGTAGTTAACAATGTAGGAGTAAATATAAATACAGCTTCATGGGCACTGTTAAGCTATGTTTCGGGAATCAA AAAAAATGTGGCTAAAAATCTGGTAGATTACAGACATGAAAACGGGGACTTTAAAAAAAGAGCAGAACTAAAGAAAGTAA AAGGTCTCGGAGCCAAAGCCTTTGAACAGATGGCAGGATTTATAGTGATTCCTGACAGTGCGAATCCTTTGGACAATACG ATAATTCACCCTGAGTCATATAAAATAGCTGAAAAAATACTCGGTGAAGCAGGATGCAGCCTGAAAGACCTGAAGGCAGA TATAAAAGGAACACAGGAAAAACTGGAAAAGTTAAATATCGAAAAAATAATAAAGGAAAATGAATTCGGTGAGGAAACAG CAAAAGATATATACAATGCTCTTCTAAAAGGCAGAAGAGATCCGCGTGAAGAGTTTGAAAAGCCGTTATTAAGATCTGAT ATACTGAATATGAATGATCTTGCCGACGGGATGATTCTTGAAGGAACTGTCAGAAATGTGGCGAAATTCGGTGTATTTGT AGATATAGGACTAAAAAACGATGCTTTGATACACGTATCGGAATTATCGAATAAATTTATTTCAGATCCTACAAAAGTAC TTTCTGTAGGTGAAATAATAAAGGTAAAAATTCTTTCCATAGATAAAAACAGGGGAAGAGTAGCATTAACAAGAAAAGGA TTATAG Protein sequence : MDILKAAANEMGLKVVQVESTMNLYDEGATVPFIARYRKEVTGNLDEEKIRELIEKVSYYRNLEKRKEEVLRLIEEQGKL TEELKTSIINAVKLQEVEDLYLPYKKKKKTKADVAAENGLEPLSLFLMDKNVNMEALKKEAEKYINEQVPGIDEAIEGAK LIIAQNISENAKYRESIRDRISKYGVLTSKVIEKNKVNDVKGVYQDYYKYSEPLTRAASHRILALNRGENEKILKVDIEI DETTHKYIVDNILRGFQNKNLTEFFTEVIEDSLSRLVYPSIKNEVRNIYTEKSEVEAIDIFKDNLEKLLLQPPLYKKAIM GLDPGYRTGCKLVVINKDGFYEKDDVVFLVEEMHSPRQVSEAKKKILQYIEDYDVDIIAIGNGTASRETESFVAKVIKES KKKVFYLIVNEAGASVYSASKLAKEEFPDLDVTARGAVSIARRIQDPMAELVKIDPKSIGVGMYQHDVNQKTLNESLEQT IEHVVNNVGVNINTASWALLSYVSGIKKNVAKNLVDYRHENGDFKKRAELKKVKGLGAKAFEQMAGFIVIPDSANPLDNT IIHPESYKIAEKILGEAGCSLKDLKADIKGTQEKLEKLNIEKIIKENEFGEETAKDIYNALLKGRRDPREEFEKPLLRSD ILNMNDLADGMILEGTVRNVAKFGVFVDIGLKNDALIHVSELSNKFISDPTKVLSVGEIIKVKILSIDKNRGRVALTRKG L |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 1e-126 | 42 |
