Gene Information

Name : Sterm_3352 (Sterm_3352)
Accession : YP_003310123.1
Strain : Sebaldella termitidis ATCC 33386
Genome accession: NC_013517
Putative virulence/resistance : Resistance
Product : CopY family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG3682
EC number : -
Position : 3527683 - 3528069 bp
Length : 387 bp
Strand : -
Note : PFAM: Penicillinase repressor; KEGG: saz:Sama_3341 CopY family transcriptional regulator

DNA sequence :
ATGAAAAATTCATTTTCTATTTCAGAAGCAGAATATCAGGTTATGAAATTAATTTGGGACAAAGCCCCTGTGAGTACAAA
GGAAGTTACTGAAATTCTCACAGTTGAAAGCTCGTGGAAGCCTAAGACAATACAGACACTGCTTTCGAGATTGGTAAAAA
AGGGTGCGATAGGCTATAAAAAAGAGGGGAGAGTATTTGTGTATACTCCGCTGATAAAAGAGGAAGATTATGTGGAACAG
GAAAGCAGCAGCTTTTTGAATAAATTTTATGACGGTGCCCTGAATTCTATGGTAGTTAACTTTTTGGAACAGGATAAGCT
TACGGAAAATGATATAAATGAACTAAAGAAAATTCTTGATATGGAAAAAGACAAGAAGGGGAAATAA

Protein sequence :
MKNSFSISEAEYQVMKLIWDKAPVSTKEVTEILTVESSWKPKTIQTLLSRLVKKGAIGYKKEGRVFVYTPLIKEEDYVEQ
ESSSFLNKFYDGALNSMVVNFLEQDKLTENDINELKKILDMEKDKKGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mecI YP_005754043.1 methicillin resistance regulatory protein MecI Not tested Type-XI SCCmec Protein 6e-21 43
blaI YP_253677.1 beta-lactamase repressor Not tested ¥ÕSh1 Protein 7e-14 43
mecI BAA82218.1 methicillin resistance protein MecI Not tested Type-II SCCmec Protein 5e-21 42
mecI NP_373280.1 methicillin resistance regulatory protein Not tested Type-II SCCmec Protein 7e-21 42
mecI YP_190060.1 methicillin-resistance regulatory protein MecI Not tested Type-II SCCmec Protein 7e-21 42
mecI YP_039517.1 methicillin resistance regulatory protein MecI Not tested Type-II SCCmec Protein 2e-18 41
mecI NP_370567.1 methicillin resistance regulatory protein Not tested Type-II SCCmec Protein 3e-20 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sterm_3352 YP_003310123.1 CopY family transcriptional regulator AM180355.1.gene595.p Protein 3e-37 66
Sterm_3352 YP_003310123.1 CopY family transcriptional regulator CP001581.1.gene771.p Protein 2e-27 48
Sterm_3352 YP_003310123.1 CopY family transcriptional regulator NC_005951.2853407.p0 Protein 1e-14 44
Sterm_3352 YP_003310123.1 CopY family transcriptional regulator NC_010419.6155809.p0 Protein 9e-15 44
Sterm_3352 YP_003310123.1 CopY family transcriptional regulator NC_010066.5774788.p0 Protein 1e-14 44
Sterm_3352 YP_003310123.1 CopY family transcriptional regulator NC_003140.1122763.p0 Protein 9e-15 44
Sterm_3352 YP_003310123.1 CopY family transcriptional regulator NC_005011.2598314.p0 Protein 1e-14 44
Sterm_3352 YP_003310123.1 CopY family transcriptional regulator FR823292.1.gene6.p01 Protein 2e-21 43
Sterm_3352 YP_003310123.1 CopY family transcriptional regulator NC_002952.2858973.p0 Protein 2e-14 43
Sterm_3352 YP_003310123.1 CopY family transcriptional regulator NC_005054.2598289.p0 Protein 2e-14 43
Sterm_3352 YP_003310123.1 CopY family transcriptional regulator NC_002745.1122814.p0 Protein 2e-21 42
Sterm_3352 YP_003310123.1 CopY family transcriptional regulator NC_002952.2861158.p0 Protein 7e-19 41
Sterm_3352 YP_003310123.1 CopY family transcriptional regulator NC_002758.1120003.p0 Protein 8e-21 41
Sterm_3352 YP_003310123.1 CopY family transcriptional regulator NC_009782.5560220.p0 Protein 8e-21 41