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Name : Sterm_3268 (Sterm_3268) Accession : YP_003310040.1 Strain : Sebaldella termitidis ATCC 33386 Genome accession: NC_013517 Putative virulence/resistance : Resistance Product : ABC transporter Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 3429922 - 3431721 bp Length : 1800 bp Strand : - Note : PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: abu:Abu_0339 ABC transporter ATP- binding/permease DNA sequence : ATGGAAAATGAAAAAGCAACAGGAATGAAAAGACTGTGGGAACTGGCAACTGTTGAAAAAGGACTGGTGTATATATCCTG TGTTTTATCGGTATTATCTACGCTTGCTTCCTTTATACCTTTTGCTGCAGTTTATTTCATCATAAAAGAGCTGTTTGATG CATCAGGAAATGTAGCTGGAATAGACGGTATTAAGATGATTAATTACGGCTGGCTTGCATTTATCGGAGTTTTTATGACA GTATTCCTGAATTTTGCAGGATTATGCTGTTCACATATAGCTGCATTTAAAACCTTGTATAAATTAAGGCTTCAGTTTAT AACACATCTTGCGAAGCTGCCCTTGGGATTTCATTCAACGAATTCTGTGGGAAGAATGAGGAAGATAATAGATGAAAATA TTGAGAAACTGGAAGTATTCATAGCACACCAGCTGCCGGATATGGCAGGTTCATTTTCGGCACCTGTAATTCTGCTTATA TTCTTGTTTCTCTTTGATTTTCGGCTGGGACTGGCGTCGCTGATCCCGGTAGTACTTGCTTATTACGTACAGACAAGATC ATTCGGGAAAACGAAAGCAAATAAATTTATGAAGCTTTATCAGGATGCCCTTGAGGAAATGAACAGTGCTTCAGTGGAAT ATATAAGAGGAATTTATATAATAAAGGCTTTTAACCAGACTGTATTTTCGTTCAAAAAATTTCGTGAAACAATAAAAATC TATACGAAATTTTGTCTGGAATACACTAATAATTTCAGGCAGATAATGACGTTATTTTTTGTATTGATTAATAATGTATA TCTTTTTCTGATACCTGCCGGACTGCTTATTTTTTCAAAAACCAATGAGAAGAGAAGCTTTGCCATGACATTTATATTTT ATCTGATATTGTCAGGATCATTTTCTTCACTGTTTATGAAATTAATGTATGTATCGTCAATGAGCTCGGAAATAGTCGAC GGTATTGAAAGAATGGACAAAATAACAGATATAAGACCGCTCCCGGAAGCTGCAAGTCCGAAATCAATAAACGGATATGA CATTGCTTTTGAAAATGTAAGTTTTTCATATAATGATTCCAAAGAAAATGAAGCATTAAGCTCTGTTTCTTTCAAAGCGA AGCAGGGGGAGATAACAGCACTTGTAGGTGCCTCAGGAAGCGGGAAAAGTACAATAGGGCATTTGACAGCAAGATTCTTT GACGTGTCGGAAGGAAGGATTACTATAGATAATGTGGATATTCGTGATATTGCTTCGGAAGAGCTGATGAAGAATATAAG CTTTGTATTTCAGGATATATTTTTATTTAAACAGAGTATTTCCGAAAATATTCTTATGGGAAATAAAACAGCCGGTATGG ATGAGGTCATAAAAGCTGCCAAAGCAGCACAATGTCATGATTTCATTATGGAGCTGCCGATGAAATACGATACTGTTATA GGAACCAAAAGCATTCATCTTTCAGGGGGAGAACGTCAGAGGATAGCACTGGCAAGGGCTGTTTTGAAAGATGCACCTGT AATTATTCTGGATGAAGCTACTGCTTTTTCAGATCCGGAAAATGAGATGAAGATACAAAATGCTCTCGGAGAACTGATAA AAAATAAAACAGCCTTGATTATTGCACACAGGCTTTCCACGATACAGAATGCCGATAATATAATAGTTATGGATAAAGGA AAAATAACGGAAGAGGGTAAACACGGGGAACTAATGGAAAAAGAAGGGAAATATTATAAGATGTGGGAAAATTATACAAA GGCTCTGTCATGGCATCTTGTGGAAGAGGGTGATCAATAA Protein sequence : MENEKATGMKRLWELATVEKGLVYISCVLSVLSTLASFIPFAAVYFIIKELFDASGNVAGIDGIKMINYGWLAFIGVFMT VFLNFAGLCCSHIAAFKTLYKLRLQFITHLAKLPLGFHSTNSVGRMRKIIDENIEKLEVFIAHQLPDMAGSFSAPVILLI FLFLFDFRLGLASLIPVVLAYYVQTRSFGKTKANKFMKLYQDALEEMNSASVEYIRGIYIIKAFNQTVFSFKKFRETIKI YTKFCLEYTNNFRQIMTLFFVLINNVYLFLIPAGLLIFSKTNEKRSFAMTFIFYLILSGSFSSLFMKLMYVSSMSSEIVD GIERMDKITDIRPLPEAASPKSINGYDIAFENVSFSYNDSKENEALSSVSFKAKQGEITALVGASGSGKSTIGHLTARFF DVSEGRITIDNVDIRDIASEELMKNISFVFQDIFLFKQSISENILMGNKTAGMDEVIKAAKAAQCHDFIMELPMKYDTVI GTKSIHLSGGERQRIALARAVLKDAPVIILDEATAFSDPENEMKIQNALGELIKNKTALIIAHRLSTIQNADNIIVMDKG KITEEGKHGELMEKEGKYYKMWENYTKALSWHLVEEGDQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1698 | YP_003446800.1 | multidrug ABC transporter ATPase/permease | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-145 | 52 |
