Gene Information

Name : Sterm_3095 (Sterm_3095)
Accession : YP_003309868.1
Strain : Sebaldella termitidis ATCC 33386
Genome accession: NC_013517
Putative virulence/resistance : Virulence
Product : NAD-dependent epimerase/dehydratase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 3240905 - 3241933 bp
Length : 1029 bp
Strand : -
Note : PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; KEGG: gur:Gura_2302 NAD-dependent epimerase/dehydratase

DNA sequence :
ATGAAAACATACTTAGTTACCGGAGGAGCAGGATTTATAGGATCGCATTTAGTGGAGAAGCTGTTAAAAAATGGAAATAA
AGTGATAAATATAGATAACTTTAATGAATTTTATAATTATAATATCAAAGTAAAAAATGTCTTGGATTCTACGGGGAAAA
TACAGAAAAATGATGATGGAGAAATAAAAGTGAATGAATTACAGGATTTGAAAAAGCTTGTTGATTCTGAAAATTATATT
TTGGAAATAGTTGATATAACAAATATGGAAATTCTAGAAGAGATTTTTCAAAGGAATGAAATAGATACAGTAATCCATTT
GGCGGCAATGGCAGGAGTAAGACCTTCTATTGAAAAGCCGCTGCTTTATGAAAAAGTAAATATCAGAGGTACAATGAATA
TCCTTGAATTGATAAATAAATATAATATTAAGAAGTTTATATGTGCTTCATCATCTTCAGTTTACGGAAACAATGAGAAG
GTTCCTTTTAGTGAGAAAGATAATGTGGACAGAGCAATATCACCGTATGCTGCTACCAAAAAATCTTGTGAGATAATCGG
ACACAGCTATCATCATTTATATGATATTGATACAATAATGCTGAGGTTTTTTACAGTATATGGTCCGAGACAAAGACCTG
ACCTTGCGATACATAAGTTTACAAAGGCTATTATTGAAGAAAAGGAAATACCATTTTATGGAGACGGAACAACTCAGAGA
GATTATACATATATAGATGATATAATTGATGGAGTTCTAAAATCAATTATTTATCTGGAAAAAAATAAGAATATCTATGA
AATAATAAACTTGGGAGAATCAGAAACAATAAGTCTTAGAAAAATGGTTAAGACTCTTGAAAATGAAATTGGGAAAAAAG
CTGTTTTAAAAAAGCTTTCGATGCAGCCTGGTGATGTGAACAGAACATTTGCGGATATTAGTAAGGCAAAAGAGTTAATA
GGGTATGATCCAAAAACAAAATTCGAAGAGGGGATAAAAAAATTCGTAAACTGGTATAGAAATAAATAA

Protein sequence :
MKTYLVTGGAGFIGSHLVEKLLKNGNKVINIDNFNEFYNYNIKVKNVLDSTGKIQKNDDGEIKVNELQDLKKLVDSENYI
LEIVDITNMEILEEIFQRNEIDTVIHLAAMAGVRPSIEKPLLYEKVNIRGTMNILELINKYNIKKFICASSSSVYGNNEK
VPFSEKDNVDRAISPYAATKKSCEIIGHSYHHLYDIDTIMLRFFTVYGPRQRPDLAIHKFTKAIIEEKEIPFYGDGTTQR
DYTYIDDIIDGVLKSIIYLEKNKNIYEIINLGESETISLRKMVKTLENEIGKKAVLKKLSMQPGDVNRTFADISKAKELI
GYDPKTKFEEGIKKFVNWYRNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1I AAA64648.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 8e-55 41