|
Name : Sterm_3039 (Sterm_3039) Accession : YP_003309812.1 Strain : Sebaldella termitidis ATCC 33386 Genome accession: NC_013517 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : 5.3.1.5 Position : 3180124 - 3181446 bp Length : 1323 bp Strand : - Note : KEGG: hypothetical protein LOC100208276; TIGRFAM: xylose isomerase; PFAM: xylose isomerase DNA sequence : ATGAAAGAATATTTTCCGGAAATAAAAGAAATAAAGTATGAAGGTCCTGAATCAAAAAATGTTATGGCTTTCAAATATTA CAATAAAGATGAGGTAATAGGCGGAAAACCGATGAGAGAACATCTGAAATTTGCAATGAGTTACTGGCATACATTAAAAG CCCAGGGACTGGATATGTTCGGCGGGGACACGATGGACAGAGCATGGAACAGATATGATGACGCATTGGAACAGGCAAAA GCAAGAGCAGATGCAGGTTTTGAATTTATGCAGAAAATAGGGATGGATTATTTCTGCTTTCATGACAGAGATATTATAAA TGAAGCAATGACATTAAAAGAAACAAACAGACTTCTTGATGAAATAGTAGATCATCTAGAAGGTCTTATGAAAAAAACAG GAATAAAACTTTTGTGGGGAACAACAAATGCTTTTAGTCATCCCAGATTTCTTCACGGAGGAGCAACTGCACCAAATGCA GACGTATTTGCGTATGCTGCGGCACAGGTAAAAAAGGCAATGGAGATAACAAAAAGATTAGGCGGGGAAAATTATGTTCT CTGGGGCGGAAGAGAGGGCTACGAAACTCTTCTGAATACTAAGTCTGATCTGGAATATGATAACTTTGCCAGATTTCTGC AGATGGTAGTGGATTACAAAGAAAAAATAGGGTTTGAAGGGCAGCTGCTTATAGAACCGAAACCAAAAGAACCTACAAAG CACCAGTATGATTTTGATACTGCTACAGTTCTTGGTTTTTTGAGAAAGTATAATCTTGATAAACATTATAAAATGAATAT AGAAGCAAACCACGCCACTCTTGCCGGACATACATTCCAGCATGAACTGAACCTTGCAAGAATAAATAATGTAATGGGTT CCATAGATGCAAATCAGGGAGATATGCTTCTGGGATGGGATACAGATCAGTTTCCTACAAATATATATGATGCTGTTCTG GCAATGTATGAAGTAATAAAAAATAACGGATTGGGTAAAGGTGGACTGAATTTTGACGCAAAAGTAAGAAGAGGCTCATT TGAAGACAAGGATTTATTTTTAGCTTATATTGCGGGTATGGACACATTCGCAAAAGGATTAACAATAGCTTACAGACTTT ATGAAGATAAAGTTTTTGAGGATTTTCAGGATAAAAGATATGAAAGTTACAAAACAGGGATAGGAAAAGATATAGTAGAA GGTAAAGTAGGATTTGAAGAACTGGCGGAATATGTAGAAAATCTTGCTGAAATAAAAAATACTTCGGGAAGACAGGAAAT GCTGGAAAGTATATTGAATTCATATATATTGGAAGCAAAATAA Protein sequence : MKEYFPEIKEIKYEGPESKNVMAFKYYNKDEVIGGKPMREHLKFAMSYWHTLKAQGLDMFGGDTMDRAWNRYDDALEQAK ARADAGFEFMQKIGMDYFCFHDRDIINEAMTLKETNRLLDEIVDHLEGLMKKTGIKLLWGTTNAFSHPRFLHGGATAPNA DVFAYAAAQVKKAMEITKRLGGENYVLWGGREGYETLLNTKSDLEYDNFARFLQMVVDYKEKIGFEGQLLIEPKPKEPTK HQYDFDTATVLGFLRKYNLDKHYKMNIEANHATLAGHTFQHELNLARINNVMGSIDANQGDMLLGWDTDQFPTNIYDAVL AMYEVIKNNGLGKGGLNFDAKVRRGSFEDKDLFLAYIAGMDTFAKGLTIAYRLYEDKVFEDFQDKRYESYKTGIGKDIVE GKVGFEELAEYVENLAEIKNTSGRQEMLESILNSYILEAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 1e-114 | 57 |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 2e-114 | 57 |
