Gene Information

Name : Sterm_3031 (Sterm_3031)
Accession : YP_003309804.1
Strain : Sebaldella termitidis ATCC 33386
Genome accession: NC_013517
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1125
EC number : -
Position : 3170964 - 3171749 bp
Length : 786 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cbc:CbuK_0365 glycine betaine transport ATP- binding protein

DNA sequence :
ATGACAGTAATAGAATTTGAAAATGTCAGCAAGTCATATGAAAAAGACAAGCCTGTGATAAAAAATCTTGATCTTAAAGT
AAAAAGGGGCGAGTTTATAACTATTCTGGGGACAAGCGGAAATGGGAAAACAACTCTTTTGAAAATGGTAAACTGTCTTG
AGAAAAAAACTTCAGGAAGTCTGAAAATACTGGATAAAGAAATAGAAGCATGGGATAAAACAGGGCTGAGAAGAAAGATA
GGTTATGTGGTACAGAGTATAGGACTTTTTCCTCATTTGAATACTGAGGAGAATATCAGCTACGTTCTTACACTGCAGAA
TAAATCTTCCGAGGAAAAAAGAAAAAAGGCAGAGGAACTTCTTGAGCTTCTGAATCTGCCGCATGATTATCTGAAAAAAT
ATCCGCGTGAGCTGAGCGGCGGAGAGCAGCAAAGGGTTGGAATAGCAAGAGCTCTTGCGTCAAGTCCGGAAATAATGCTT
ATGGATGAGCCTTTTGGGGCTTTGGATGAGATAAACAGAAGAAAGCTTCAGGAACAGGTAAAAAAGCTTCAAAAAGAGCT
GGGACTTACAATTATGCTGGTTACTCATGATATAGAAGAGGCTTTTACGCTGGGAAGCAGAATTATAATTATGCATAACG
GAAAAATAGAACAGATAGGTACAAAGGAAGAGTATTACCAAAGTGAAAATACAAAATTTGTAAATGAATTTTTAAGTGAG
AAGCTAAAATTTGTGTATATAAAAGATAATGATATAAGCTTGAATGAGTTAAAAAATTTAAGATAA

Protein sequence :
MTVIEFENVSKSYEKDKPVIKNLDLKVKRGEFITILGTSGNGKTTLLKMVNCLEKKTSGSLKILDKEIEAWDKTGLRRKI
GYVVQSIGLFPHLNTEENISYVLTLQNKSSEEKRKKAEELLELLNLPHDYLKKYPRELSGGEQQRVGIARALASSPEIML
MDEPFGALDEINRRKLQEQVKKLQKELGLTIMLVTHDIEEAFTLGSRIIIMHNGKIEQIGTKEEYYQSENTKFVNEFLSE
KLKFVYIKDNDISLNELKNLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-39 45
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 6e-39 45