Gene Information

Name : Sterm_2324 (Sterm_2324)
Accession : YP_003309109.1
Strain : Sebaldella termitidis ATCC 33386
Genome accession: NC_013517
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2460782 - 2461453 bp
Length : 672 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gsu:GSU0451 DNA-binding response regulator

DNA sequence :
ATGAAAGAGAAAATATTGATTATAGAAGATGATCCGAAAATATCAAGACTTATAGAAATTGAACTAAAGTTCGAGGGATT
TGAAGTAAGCTTTGCCTATGACGGGAAGGAAGGGCTGAACAGTGCAAAATATAATTCTTATGATTTAATAATTCTGGATC
TTATGCTGCCTAAAATGAACGGGATTGAAGTATGTAAAAGAATCAGAGAATTTTCAGAGGTACCTATCATAATGTTAACT
GCAAAAGATGAAATAAGTGATAAAGTAGTAGGACTGGATTACGGTGCTGATGATTATATGACAAAGCCTTTTTCAAATGA
GGAATTGATAGCCCGTATAAAAGCACTGATAAGACGTACTAAAAAAAGAAATAATCAGGAAGAATTTGTATATGAGGATT
TGAAAATTAACTACTCTACATATGAAGTATTTAGAGGAGAAACATTAATAAGCTTATCAAAAAGAGAATTCGAGCTTTTG
GATTATCTTGTGCTGAATAAAGGGATAGTTCTGTCAAGGGATAAAATTCTTGAGAATGTATGGGGATTTGAATATATAGG
TAATGATAACATTCTTGATCTGTACATAAAATATCTGAGAGATAAAATAGACAAGCCTTATGAAAGAAAATTTATACAGA
CAGTAAGAGGTCTGGGATTTATTTTTAAATAA

Protein sequence :
MKEKILIIEDDPKISRLIEIELKFEGFEVSFAYDGKEGLNSAKYNSYDLIILDLMLPKMNGIEVCKRIREFSEVPIIMLT
AKDEISDKVVGLDYGADDYMTKPFSNEELIARIKALIRRTKKRNNQEEFVYEDLKINYSTYEVFRGETLISLSKREFELL
DYLVLNKGIVLSRDKILENVWGFEYIGNDNILDLYIKYLRDKIDKPYERKFIQTVRGLGFIFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU98_0912 YP_001200470.1 NisR Not tested 89K Protein 9e-18 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sterm_2324 YP_003309109.1 two component transcriptional regulator, winged helix family NC_002952.2859858.p0 Protein 5e-48 46
Sterm_2324 YP_003309109.1 two component transcriptional regulator, winged helix family NC_007622.3794948.p0 Protein 5e-48 46
Sterm_2324 YP_003309109.1 two component transcriptional regulator, winged helix family NC_003923.1003417.p0 Protein 5e-48 46
Sterm_2324 YP_003309109.1 two component transcriptional regulator, winged helix family NC_013450.8614146.p0 Protein 5e-48 46
Sterm_2324 YP_003309109.1 two component transcriptional regulator, winged helix family NC_002951.3238224.p0 Protein 5e-48 46
Sterm_2324 YP_003309109.1 two component transcriptional regulator, winged helix family NC_007793.3914065.p0 Protein 5e-48 46
Sterm_2324 YP_003309109.1 two component transcriptional regulator, winged helix family NC_002758.1121390.p0 Protein 5e-48 46
Sterm_2324 YP_003309109.1 two component transcriptional regulator, winged helix family NC_010079.5776364.p0 Protein 5e-48 46
Sterm_2324 YP_003309109.1 two component transcriptional regulator, winged helix family HE999704.1.gene2815. Protein 1e-44 46
Sterm_2324 YP_003309109.1 two component transcriptional regulator, winged helix family AE015929.1.gene1106. Protein 1e-41 45
Sterm_2324 YP_003309109.1 two component transcriptional regulator, winged helix family NC_012469.1.7685629. Protein 4e-39 45
Sterm_2324 YP_003309109.1 two component transcriptional regulator, winged helix family HE999704.1.gene1528. Protein 5e-46 44
Sterm_2324 YP_003309109.1 two component transcriptional regulator, winged helix family BAC0125 Protein 1e-41 43
Sterm_2324 YP_003309109.1 two component transcriptional regulator, winged helix family NC_002952.2859905.p0 Protein 3e-46 43
Sterm_2324 YP_003309109.1 two component transcriptional regulator, winged helix family NC_007793.3914279.p0 Protein 3e-46 43
Sterm_2324 YP_003309109.1 two component transcriptional regulator, winged helix family NC_003923.1003749.p0 Protein 3e-46 43
Sterm_2324 YP_003309109.1 two component transcriptional regulator, winged helix family NC_002745.1124361.p0 Protein 3e-46 43
Sterm_2324 YP_003309109.1 two component transcriptional regulator, winged helix family NC_009782.5559369.p0 Protein 3e-46 43
Sterm_2324 YP_003309109.1 two component transcriptional regulator, winged helix family NC_002951.3237708.p0 Protein 3e-46 43
Sterm_2324 YP_003309109.1 two component transcriptional regulator, winged helix family NC_007622.3794472.p0 Protein 3e-46 43
Sterm_2324 YP_003309109.1 two component transcriptional regulator, winged helix family NC_002758.1121668.p0 Protein 3e-46 43
Sterm_2324 YP_003309109.1 two component transcriptional regulator, winged helix family NC_009641.5332272.p0 Protein 3e-46 43
Sterm_2324 YP_003309109.1 two component transcriptional regulator, winged helix family NC_013450.8614421.p0 Protein 3e-46 43
Sterm_2324 YP_003309109.1 two component transcriptional regulator, winged helix family AM180355.1.gene1830. Protein 2e-32 42
Sterm_2324 YP_003309109.1 two component transcriptional regulator, winged helix family NC_014475.1.orf0.gen Protein 9e-37 42
Sterm_2324 YP_003309109.1 two component transcriptional regulator, winged helix family NC_005054.2598277.p0 Protein 9e-37 42
Sterm_2324 YP_003309109.1 two component transcriptional regulator, winged helix family AE016830.1.gene1681. Protein 1e-40 42
Sterm_2324 YP_003309109.1 two component transcriptional regulator, winged helix family DQ212986.1.gene4.p01 Protein 7e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sterm_2324 YP_003309109.1 two component transcriptional regulator, winged helix family VFG1390 Protein 1e-48 43