Gene Information

Name : Sterm_2073 (Sterm_2073)
Accession : YP_003308859.1
Strain : Sebaldella termitidis ATCC 33386
Genome accession: NC_013517
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2200829 - 2201515 bp
Length : 687 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mxa:MXAN_4199 macrolide efflux ABC transporter ATP-binding protein

DNA sequence : 
ATGATAGTTGTTGAAAATCTAAGAAAAGTATATGAGAATGGTCCGCTTTCATTGGAAGTTTTGAAAGGAATAGACCTAAA
GGTGGAATCAGAAGAATACGTAGCTCTTATGGGGCCGAGCGGAAGCGGAAAATCAACTTTTATGAATATTCTGGGATGCC
TGGATCAGCTCACAAGCGGTAAATATTATCTTGACGGTATAGATATTTCCACAATGACACAGGACGAACTTTCTGCAATA
AGAAACCAAAAGCTGGGATTTATATTTCAATCATTTAATCTGCTCCCGAAGCTGTCGTCGCTGGAAAATGTAATACTTCC
TGCAATGTATGCCAATATGCCGAAAAAAGAAAGATATGAAAGAGGTGTGGAGGCTCTTACAGCGGTAGGACTTGGTGACA
GAGTACATCATAAGCCTAATGAGCTTTCCGGAGGGCAGAGACAAAGAGTGGCAATTGCCCGTTCTATAATAAATACACCT
AAGATACTCCTTGCGGATGAGCCTACAGGGAATCTTGATACACGATCAGGTGAAGAAGTACTGGGCATATTTAAACAGCT
TAATGATAAAGGTACTACAATAGTAATGGTAACACATGAGGAAGATGTGGCAGAACACTGCAAAAGAATAATAAGACTCA
GAGACGGTGTTATAGAAGTGGATGAAGAGGTGAAAAATAGAAGATGA

Protein sequence : 
MIVVENLRKVYENGPLSLEVLKGIDLKVESEEYVALMGPSGSGKSTFMNILGCLDQLTSGKYYLDGIDISTMTQDELSAI
RNQKLGFIFQSFNLLPKLSSLENVILPAMYANMPKKERYERGVEALTAVGLGDRVHHKPNELSGGQRQRVAIARSIINTP
KILLADEPTGNLDTRSGEEVLGIFKQLNDKGTTIVMVTHEEDVAEHCKRIIRLRDGVIEVDEEVKNRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-32 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-33 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sterm_2073 YP_003308859.1 ABC transporter NC_012469.1.7686878. Protein 4e-54 52
Sterm_2073 YP_003308859.1 ABC transporter NC_008702.1.4606598. Protein 1e-45 47
Sterm_2073 YP_003308859.1 ABC transporter CP001581.1.gene798.p Protein 1e-40 44
Sterm_2073 YP_003308859.1 ABC transporter CP001581.1.gene598.p Protein 1e-38 43