|
Name : Sterm_2031 (Sterm_2031) Accession : YP_003308817.1 Strain : Sebaldella termitidis ATCC 33386 Genome accession: NC_013517 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2163359 - 2164630 bp Length : 1272 bp Strand : + Note : KEGG: geo:Geob_1192 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl- tRNA synthetase, class IIa-like DNA sequence : ATGATAGATATGAAATTTATTAGGGAAAATACCGAAATAATAAGAAAGAGCCTGAAAGACAGAAACAGTAATTTTGATTT GGACGGGCTTTTGAAAGCAGATGAAGCAAGACGGGAACTGCTTCAGGAAGCAGAAACATTAAAAAAAGAGAAGAATGATC AGAGTGCATTAATAGGGAAATATAAAAGAGAAGGAAAAAATGCAGATGAGCTTTTGGAAAAAATGGGAAAAGTAAGTGAC AAAATAAAAGAGCTTGACGAAAAAACAGCAAAAATAGAAGAGGAACAAAATTATCTTTTGCTGACTATACCGAATAAGCT GCATGAAAGTACACCTGTCGGAGCTTCGGAAGATGACAATGTGGAGGTAAGAAAATGGGGAGAACCGAAAAAGTTTGGTT TTGAGCCAAAACCGCATGAAGAATTAGGGACAGAGCTGGGAATCCTTGATTTTGAAAGAGGAGTGAAGCTGTCAGGATCA AGATTTACAGTTTATAAAGGAATGGCAGCAAAGCTGGAAAGAGCACTTATTAATTTTATGCTGGATCTTCATACAAGTGA GCACGGCTATGAAGAAATGCTGACACCGCAGCTGGTAAAGAGAGATATAATGGTAGGAACAGGACAGCTTCCAAAGTTTG AAGATGATGCATATAAGACTACAGATGATATGTTTTTGATTCCTACGGCAGAAGTGACTCTTACTAATCTTCATAAAGAT GAAATACTTGCCGAAAGTGAGCTTCCAAAGTATTACTGCGGGTTTACCGCATGCTTCAGAAGAGAGGCCGGATCACATGG CAAGGATATGAAAGGGATACTTAGACAGCATCAGTTTAATAAAGTAGAAATGGTAAAGATAGTACACCCTGAGAATTCAT ATGATGAGCTGGAGAAAATGGTAAATAATGCGGAAACAGTACTGCAAAAATTAAATATTCCTTACAGAGTGCTTGCATTA TGCAGCGGCGATATAGGCTTCGGTGCGTCAAAGACTTATGATCTGGAAGTATGGATTCCAAGCCAGAATAAATACAGAGA AATTTCATCTTGCTCAAATACTGAGGATTTTCAGGCAAGAAGAGCAATGATAAAGTACAGATCAGAGACAGATAAAAAGA GCTATTTTGTTCATACATTAAATGGATCAGGGCTAGCAGTGGGGAGAACACTTCTTGCCATAATGGAAAACTATCAAAAA GAAGACGGAAGTATAGAAATACCTGAGGTTCTGATACCTTATATGGGCGGTATTACCGAGATAAAGAAATAA Protein sequence : MIDMKFIRENTEIIRKSLKDRNSNFDLDGLLKADEARRELLQEAETLKKEKNDQSALIGKYKREGKNADELLEKMGKVSD KIKELDEKTAKIEEEQNYLLLTIPNKLHESTPVGASEDDNVEVRKWGEPKKFGFEPKPHEELGTELGILDFERGVKLSGS RFTVYKGMAAKLERALINFMLDLHTSEHGYEEMLTPQLVKRDIMVGTGQLPKFEDDAYKTTDDMFLIPTAEVTLTNLHKD EILAESELPKYYCGFTACFRREAGSHGKDMKGILRQHQFNKVEMVKIVHPENSYDELEKMVNNAETVLQKLNIPYRVLAL CSGDIGFGASKTYDLEVWIPSQNKYREISSCSNTEDFQARRAMIKYRSETDKKSYFVHTLNGSGLAVGRTLLAIMENYQK EDGSIEIPEVLIPYMGGITEIKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-111 | 56 |
