Gene Information

Name : Sterm_1811 (Sterm_1811)
Accession : YP_003308600.1
Strain : Sebaldella termitidis ATCC 33386
Genome accession: NC_013517
Putative virulence/resistance : Virulence
Product : KpsF/GutQ family protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : 5.3.1.13
Position : 1945713 - 1946672 bp
Length : 960 bp
Strand : +
Note : KEGG: vco:VC0395_A2104 hypothetical protein; TIGRFAM: KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein; SMART: CBS domain containing protein

DNA sequence :
ATGGATAAAAGTCTTACAGAAGCAAAAAGAGTTTTTGAAGCTGAAATTGAAGAACTGGTAAAAGTAAAAGACAGACTGGA
TGAAAATTTTTCAAAGATGGTGGACATGATTTATGAGTCAAGCGGGAAAGTAGTAATTACCGGTATCGGCAAGTCGGGAC
ATATAGGCAAAAAAATATCTGCTACTCTGGCTTCTACAGGAACAAATTCGGTATTTATAAATGCAGCCGAAGCACTTCAC
GGAGATCTCGGGGTTATTAAAAAAGGAGATATAGTATTAGCTATTTCAAACAGCGGAAATTCTGATGAAATATCTAATAT
ACTGCCTTCTGTGAGAAGAATAGGCGCTGATATAATTGCTTTTACGGGGAATAAAATTTCCGCACTTGGAAAAGAGGCAG
ACCTGATAATAAATATAGCAATAGATAAAGAAGCCTGCCCGATGGGACTTGCTCCGATGACATCAGCTACGGTAACGCTG
GTAATGGGAGATGCACTTGCTGCTGCATTAATGCAGAAGAGAGACTTTAAACCGGAAAATTATGCAGTATACCATCCGGG
AGGAAGTCTGGGAAGAAGACTTCTTTTGAAAGTAAAAGATCTTATGCATAAGAATGACGAGCTTCCGAAGCTTACCAAAG
ATACTCATATAGATACAGTGCTTATGGAGCTTACAAAGAAAAAAATGGGAGCTGTGTGTATAGCAGAAGATGACAGGCTT
ATAGGAATTATAACAGAAGGTGACATAAGACGGGCACTGACGCATAAGGAGAAATTTTTTGATTATACAGCAGAAGATGT
AATGACTAAAAATCCTGTTTATGTTACACCAGAAATACAGGCAATAGAAGCACTGGAAAAAATGGAAGCGAGAGAAAGCC
AGATCACTGTACTTCCTGTAGTTGATAATGATAAACTGGTAGGAATAATAAGAATACATGATTTATTAAATTTAAGATAG

Protein sequence :
MDKSLTEAKRVFEAEIEELVKVKDRLDENFSKMVDMIYESSGKVVITGIGKSGHIGKKISATLASTGTNSVFINAAEALH
GDLGVIKKGDIVLAISNSGNSDEISNILPSVRRIGADIIAFTGNKISALGKEADLIINIAIDKEACPMGLAPMTSATVTL
VMGDALAAALMQKRDFKPENYAVYHPGGSLGRRLLLKVKDLMHKNDELPKLTKDTHIDTVLMELTKKKMGAVCIAEDDRL
IGIITEGDIRRALTHKEKFFDYTAEDVMTKNPVYVTPEIQAIEALEKMEARESQITVLPVVDNDKLVGIIRIHDLLNLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 6e-45 41
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 3e-45 41
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 9e-45 41