Gene Information

Name : Sterm_1547 (Sterm_1547)
Accession : YP_003308337.1
Strain : Sebaldella termitidis ATCC 33386
Genome accession: NC_013517
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : -
Position : 1646962 - 1648941 bp
Length : 1980 bp
Strand : +
Note : TIGRFAM: transketolase; PFAM: transketolase central region; transketolase; KEGG: dat:HRM2_48140 Tkt1

DNA sequence :
ATGGAAAAAAATGTAAAACAATTGTCAGTAGATGCAATAAGAATGCTGGGAGTGGATGCGATAGAGAAGTCAAAGTCAGG
ACATCCGGGAATAGTATTAGGTGCGGCACCTATGGCGTACACACTTTGGAGCGAACACCTTAACGTGAATCCAAAAGAAC
CTGAATGGCTGAACAGAGACAGATTTGTACTGTCAGCTGGACACGGATCGATGTTAATATATTCATTATTACATTTAAGC
GGTTTTGATGTGTCTATGGAAGACATAAAGAATTTCAGACAGTGGGGCTCTAAGACACCGGGACATCCTGAGTTCGGACA
TACAAAAGGAGTGGACACGACAACAGGTCCCCTTGGACAGGGAATCGCCACAGCGGTGGGAATGGCACTGGCAGAAACAC
ATCTTGCGAAAAAATATAATAAAGAAGATATGAATATAATAGATCACTTTACATATGTAATCTGCGGAGACGGAGATCTT
ATGGAAGGTGTGAGCGGAGAGGCAAGTTCATTTGCAGGAGTACAGAAGCTGGGGAAGCTGGTAGTACTTTATGATTCCAA
TGATATATGTCTTGACGGTGAAACAAGAGAAACATTTACAGAAGATGTGGCTAAGAGATATGAAGCTTACGGCTGGCAAG
TACTAACGGTAAAAGACGGCAATGATCTTGGAGCAATAGATGCGGCAATAAAAGAAGCAAAGAAAGATGTAACAAAGCCG
ACATTAATAGAGATAAAAACAGTAATAGGATACGGAGCACCAACAAAAGCAGGAAAGAACAGTTCACACGGGGCACCTTT
GGGAGCAGAGGAAACAAAAGGATTAAGAGAATATCTGAAATGGGACTATGAAGCATTTGAAGTTCCGGCAGAGGTATATG
AGGACTATAAGAAATCAGTAGCAGAAAGAGGAGCGGCAAAGTCAGAGGAATGGAAAGCCCTTGTAGGAAAGTATAAGGAA
AAATATCCTGAGCTGGGAAAAGAGATAGAAGAAATAGCAGCAGGAACATTATTTGATAATATAAAGATAGAATTCCCGGC
ATATGAAGCAGGACATTCACAGGCAACAAGAAATGCATCAAATGATGCGATAAATGCAATAGCAGGACAGATACCGAATT
TCATAGGAGGCTCGGCAGACTTAGCACATTCAAATATGACAATGATAAAAGGAGAAGGACTGTTTGACGCAGAGCACAGA
GAAAACAGAAATATTCAGTTTGGAGTAAGAGAATTTGCAATGGGAGCGATACTGAACGGAATGGTATTACACGGAGGACT
GAAGACATTCGGGGGAACATTCTTTGTATTCAGTGACTATGTGAAGGCAGCAATAAGATTATCAGCATTAATGGGATTAC
CGGTAACTTATGTACTTACCCATGACAGTATAGCAGTAGGAGAAGACGGTCCGACACATGAACCGATAGAACAGCTTGCA
GGTTTAAGAGCAATTCCGAACATAAATGTAATAAGACCAGCAGACAGCAGAGAAACACAGGGAGCATGGAAGGTAGCTGC
AGAAAGTAAGAAGACACCGACACTTTTAGTATTAAGCAGACAGAATCTGGATGTAACAGAAGGTTCGTCAATGGAAGATG
TAGCAAAGGGAGCATATGTATCTTACGAGACAAACAAAGATTTTGGAAGAATAATAATAGCAACAGGATCAGAAGTATCT
CTGGCAGTGGGAGCAGCAAAGGAACTGGAAAAATCAGGAGAATCAGTAAGGGTAGTAAGTATGCCGAGTATGGAGCTTTT
TGAAAGACAGAGCTGTGAGTATAAGGAAAGTATCCTTCCAAAAGGAGTAAGAAGCAGAGTATCACTTGAGATGGGATCGA
CATTCGGATGGCATAAATATGTAGGAATGGACGGACTGGCAATAGGAATAGATACATTCGGAGCATCAGCACCGGCAGGA
AAAGTAATAGAAGAATACGGATTTACAGTAGAAAAAATCGTTAATAAAATAAAAGGATAA

Protein sequence :
MEKNVKQLSVDAIRMLGVDAIEKSKSGHPGIVLGAAPMAYTLWSEHLNVNPKEPEWLNRDRFVLSAGHGSMLIYSLLHLS
GFDVSMEDIKNFRQWGSKTPGHPEFGHTKGVDTTTGPLGQGIATAVGMALAETHLAKKYNKEDMNIIDHFTYVICGDGDL
MEGVSGEASSFAGVQKLGKLVVLYDSNDICLDGETRETFTEDVAKRYEAYGWQVLTVKDGNDLGAIDAAIKEAKKDVTKP
TLIEIKTVIGYGAPTKAGKNSSHGAPLGAEETKGLREYLKWDYEAFEVPAEVYEDYKKSVAERGAAKSEEWKALVGKYKE
KYPELGKEIEEIAAGTLFDNIKIEFPAYEAGHSQATRNASNDAINAIAGQIPNFIGGSADLAHSNMTMIKGEGLFDAEHR
ENRNIQFGVREFAMGAILNGMVLHGGLKTFGGTFFVFSDYVKAAIRLSALMGLPVTYVLTHDSIAVGEDGPTHEPIEQLA
GLRAIPNINVIRPADSRETQGAWKVAAESKKTPTLLVLSRQNLDVTEGSSMEDVAKGAYVSYETNKDFGRIIIATGSEVS
LAVGAAKELEKSGESVRVVSMPSMELFERQSCEYKESILPKGVRSRVSLEMGSTFGWHKYVGMDGLAIGIDTFGASAPAG
KVIEEYGFTVEKIVNKIKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 2e-150 50
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 2e-146 47