Gene Information

Name : Sterm_1516 (Sterm_1516)
Accession : YP_003308306.1
Strain : Sebaldella termitidis ATCC 33386
Genome accession: NC_013517
Putative virulence/resistance : Unknown
Product : glycine/betaine/L-proline ABC transporter ATPase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1125
EC number : -
Position : 1603953 - 1605104 bp
Length : 1152 bp
Strand : -
Note : KEGG: ses:SARI_01426 hypothetical protein; TIGRFAM: glycine betaine/L-proline ABC transporter ATPase; PFAM: ABC transporter related; CBS domain containing protein; SMART: ATPase AAA; CBS domain containing protein

DNA sequence :
ATGATAAAATTTCAAAATATCAACAAAAGTTTCAGAAATCAAAAAGTTTTGAATAATATTAATTTAAATATCAATAGCGG
AGAACTCACAGTTCTCATAGGCCCCAGCGGATGCGGGAAGACCACCACTCTGAAAATGATTAACAGACTTATTCACCCCA
CTTCAGGACATATTTTTATAAACGATGAAAATATCGAAAAAAAAGATATTATAAAGCTGCGTAGAAAAATTGGATATGTT
ATCCAGCAGACCGGTCTTTTTCCACATATGACAGTAAAAGAAAATATCGAGATTATACCAAGGCTGGAACATGTAAAAAG
CGACGAAATTTCTAAAAAAACAGTGGAATTAATGAAAATGATCGATCTGGATCCTGATGAATATCTGTATCGGTTCCCTG
CACAGCTCAGCGGAGGACAGATGCAGAGAGTAGGTGTCGCAAGGGCATTCGCATACGATCCCGATATTATTCTTATGGAT
GAGCCGTTTTCTGCACTGGATCCTATCAGCAGAAACCAGCTTCAGCAGGAGCTTATTGCTCTTCAGGAAAAAATGAAAAA
AACCATAGTTTTCGTTACTCACGATATGGATGAAGCTGTAAAAATTGCCGATAGAATCTGTATTATGAATAACGGTGAAA
TAGTACAGGCTGATACTCCGGAAAATATATTAAAAGAGCCCATTAATGAATTTGTCAGTAATTTCGTAGGAAAAAACAGA
ATATGGACTGTGCCTGATCTGATAAGGGCGAAAGATATTATGATAAAAAATCCTGTTACGGCAGGCAGCGACGAACCGCT
GTGCAACTGTATAGAAAAAATGCGTAAAAGCAAGGTTGACAGTATCTTTATAGTAGACAGCAATGATAAGCTGGAAGGCT
TAATCACTATCCGTACACTGAATGATGTGCATTCCCATAATGTCAAAGCATCCGAAGTGATGAATAAAAGCCTCTTTACT
ATCTATGAAGATTACAGCATAATAAATCTTCTGCAGCTGATTATAGATAATAATCTTTCGGCAATCCCTGTAGTAGACAG
ACGGCAAAGACTAAAAGGTCTTATTACTCCCGGTACCCTTGTTACTTCTCTGGGTATGCAGTATCTGGACAATGAAAATG
AAAAGGCAGGTGACAATAATGAACTTTCTTAA

Protein sequence :
MIKFQNINKSFRNQKVLNNINLNINSGELTVLIGPSGCGKTTTLKMINRLIHPTSGHIFINDENIEKKDIIKLRRKIGYV
IQQTGLFPHMTVKENIEIIPRLEHVKSDEISKKTVELMKMIDLDPDEYLYRFPAQLSGGQMQRVGVARAFAYDPDIILMD
EPFSALDPISRNQLQQELIALQEKMKKTIVFVTHDMDEAVKIADRICIMNNGEIVQADTPENILKEPINEFVSNFVGKNR
IWTVPDLIRAKDIMIKNPVTAGSDEPLCNCIEKMRKSKVDSIFIVDSNDKLEGLITIRTLNDVHSHNVKASEVMNKSLFT
IYEDYSIINLLQLIIDNNLSAIPVVDRRQRLKGLITPGTLVTSLGMQYLDNENEKAGDNNELS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-56 43
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-55 42