Gene Information

Name : Sterm_0125 (Sterm_0125)
Accession : YP_003306941.1
Strain : Sebaldella termitidis ATCC 33386
Genome accession: NC_013517
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 4-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0235
EC number : -
Position : 133356 - 134057 bp
Length : 702 bp
Strand : -
Note : TIGRFAM: L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein; KEGG: msu:MS0046 L-ribulose-5-phosphate 4-epimerase

DNA sequence :
ATGCTGGAAGAATTAAAAGAAAGAGTATATAAGGCAAATATGGAGCTTCCTGAAAAGGGACTGATACTTTATACATGGGG
GAATGTAAGCGGAATAGACAGGGAAAAAGGACTGATAGTAATAAAGCCGAGCGGAGTGGAATATGATGTAATGAAGGCTT
CTGATATGGTAGTAGTGGATATGGACGGCAGAGTAGTGGAAGGAAGCCTGAATCCTTCGTCAGATACAGCGACTCATATA
GAGCTGTACAAAGCCTTTGAAGAGGTAGGAGGAATAGTTCATACACATTCCACATGGGCGACAATATGGTCACAGAGCGG
CAGAGACATAAAAGCTTACGGAACAACCCATGCAGATTATTTTTACGGACCGATTCCGTGTACAAGAAAGATGACAGCGG
AAGAGATAGAAGGAGAATATGAGAAGGAAACGGGTCGTGTAATAGTGGAAACATACAGAGAAAGAAATCTGAATCCCTTA
TATGTACCGGGAGTACTGGTAAACAGCCACGGACCGTTTACATGGGGAAAGAGTCCGGAGGAAGCAGTGCATAATTCGGT
GGTACTGGAAGAGATAGGAAGAATGGCAGCAAGTATGGAGATGTTTAATGAAAACACGAAGAGTATGCAGCAGGAGCTTC
TGGATAAGCATTTCTTAAGAAAACACGGGGCTAATGCCTATTACGGACAGGGGAAAAAGTAA

Protein sequence :
MLEELKERVYKANMELPEKGLILYTWGNVSGIDREKGLIVIKPSGVEYDVMKASDMVVVDMDGRVVEGSLNPSSDTATHI
ELYKAFEEVGGIVHTHSTWATIWSQSGRDIKAYGTTHADYFYGPIPCTRKMTAEEIEGEYEKETGRVIVETYRERNLNPL
YVPGVLVNSHGPFTWGKSPEEAVHNSVVLEEIGRMAASMEMFNENTKSMQQELLDKHFLRKHGANAYYGQGKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 8e-61 62