Gene Information

Name : Smon_0223 (Smon_0223)
Accession : YP_003305586.1
Strain : Streptobacillus moniliformis DSM 12112
Genome accession: NC_013515
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 264771 - 265481 bp
Length : 711 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU30760 manganese ABC transporter ATP- binding protein

DNA sequence : 
ATGAAGGTTATAGAAATTAAGGATTTAGTAGTTACTTATGATTTAGAACCTGTACTTGAAAATATTAATCTTGAAATAGA
AAAAGGAGATTTAATGGCTCTAGTAGGACCAAATGGTGCAGGTAAATCAACACTAATTAAAACCATATTAGAGTTTATTA
AACCAGTAGTTGGAAATATAAAGGTAAATGGTAAAGAATATAGGCAAGAAAAGAAAAAAATAGCATATGTTCCACAAAGG
GGAAGTGTAGATTGGGACTTCCCTACTACTCTTTTTGATGTAGTTATGATGGGATGTTATGGTAGAGTTGGATTTTTGAA
AAAAATACCAAAAGAAGAAATAGAAAAAGTTAACAATGCAATAAAACAAGTTGAAATGTTGGAATTTAAAGATAGACAAA
TATCAGAACTTTCTGGAGGACAGCAGCAAAGAGCATTTCTTGCAAGAGCTTTAGTTCAAGATGCAGAAATATACTTAATG
GATGAACCTTTTCAAGGGGTTGATGCTGTTACAGAAAAATCAATAATTAGAATACTTAAGGAATTGAAAAACCAAGGTAA
AACTGTAATAGTAGTGCATCATGATTTGCAAACTGTAGAAGAATACTTTGATAGTGTTACATTTATAAATAAAAGTATAG
TAACTAGTGGTAGTGTAAAAGATGTATATACTAAAGAAAATATAGAAAAAACATATAGTAGAAATGTTTGA

Protein sequence : 
MKVIEIKDLVVTYDLEPVLENINLEIEKGDLMALVGPNGAGKSTLIKTILEFIKPVVGNIKVNGKEYRQEKKKIAYVPQR
GSVDWDFPTTLFDVVMMGCYGRVGFLKKIPKEEIEKVNNAIKQVEMLEFKDRQISELSGGQQQRAFLARALVQDAEIYLM
DEPFQGVDAVTEKSIIRILKELKNQGKTVIVVHHDLQTVEEYFDSVTFINKSIVTSGSVKDVYTKENIEKTYSRNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 4e-45 43
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 3e-45 43
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-44 42
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-44 42
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-44 41
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 8e-45 41
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 7e-45 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smon_0223 YP_003305586.1 ABC transporter BAC0400 Protein 7e-63 53
Smon_0223 YP_003305586.1 ABC transporter BAC0350 Protein 4e-45 41
Smon_0223 YP_003305586.1 ABC transporter BAC0440 Protein 2e-45 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smon_0223 YP_003305586.1 ABC transporter VFG0526 Protein 4e-45 41