Gene Information

Name : Smon_1034 (Smon_1034)
Accession : YP_003306376.1
Strain : Streptobacillus moniliformis DSM 12112
Genome accession: NC_013515
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : -
Position : 1124259 - 1125749 bp
Length : 1491 bp
Strand : -
Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: gsu:GSU2271 lysyl-tRNA synthetase

DNA sequence :
ATGGAAAATAAAGAAAATGCAGTTAATGAAACCTATGTGATGAAAGAAAAATATAGAAAAATTGATGAATTAAAATCTTT
AGGATTAGAACCATATGGAAGATATTTTGATAAAAAAGATGAAATAGGAAGTATTTTAAATTTTGATGAAACTTCAGAAA
AAGAATTTAAAACTGCTGGAAGAATAATGTCATATAGAAGAATGGGGAAAAATGGGTTTGCACACATTCAAGATCCTACA
GGAAAAATTCAAATTTATGCTAAAAAAGATGAAATAGGTGAAGAAGAATACGAAACATTTAAAAGACTAGCTACTGGAGA
TTTCGTTGGAGTAGTAGGTAAATTATTTCGTACACAAACAGGTGAATTAACAATTAAAGCATCACATTTAGAGATATTAT
CTAAGAATATAAGACCTTTACCTGATAAGTTTTCTGGACTTCAAAATATTGAAATGCGTTATAGACAAAGATATATTGAT
TTAGTAATGAATCCTGAAGTTATGGATACTATGAAAAAAAGATTTGAAATAATTAGATATTTTAGAACATATTTAGAGAA
AAAGGGATTTTTAGAAGTTGAAACACCTATGTTACACCCAACTTTAGGTGGAGCTAATGCAAGACCATTTATTACTCATC
ATAATGCCTTAGATATGGATATGTACTTAAGAATAGCACCAGAACTTTATTTAAAAAGATTATTAGTTGGAGGATTTGAA
AAAGTCTTTGAAATAAATAGAAACTTTAGAAATGAAGGGGTATCTATTAAACATAATCCAGAATTTACTATGATGGAACT
TTACCAAGCTTATGCTGACTTTAATGATATGATGGATATTACTGAGGATTTAATTTCATCACTTACTTATCATTTATATG
GAACTTATGAAATACCTTATGAAGATAAAACTGTAAATCTTGCAAAACCTTGGAGAAGAGTAACTATGAAAGAAATAGTT
AGAGAACATACAGGATTTGTTATGGATGAAAATACTACAGATGAATCTGCTATAGAATTTGCTAAAGGTTTAGGAATACA
TTTAGATAAAGATAAGACTTATACTAAATTTGGTATTTTAAATCTATTATTTGAAGAAAAAGTAGAACATACTATAGTTA
ATCCAACATTTGTTACAGATTATCCAAAAGAAATATCACCTTTATCTAAAAACTCTAAAGGTGAAAGTGATTGGGTAGAT
AGATTTGAATTATTCATTACAGGTAGAGAATATGGTAATGCTTATTCTGAGTTAAATGATCCTAAAGATCAAAAAGAAAG
ATTTGAAGAGCAAGTTAGAGCAAAAGAAAATGGAGATGATGAAGCATCTGAAATGGATTTAGACTATATCAGAGCTTTAG
AATATGGAATGCCACCTGCTGGAGGACTTGGAATAGGGATAGATAGACTTGTAATGTTACTTACAAATTCATCATCTATA
AGAGATGTAATTATGTTCCCTACTTTAAAAAAAGAAACACATTTTGAATAA

Protein sequence :
MENKENAVNETYVMKEKYRKIDELKSLGLEPYGRYFDKKDEIGSILNFDETSEKEFKTAGRIMSYRRMGKNGFAHIQDPT
GKIQIYAKKDEIGEEEYETFKRLATGDFVGVVGKLFRTQTGELTIKASHLEILSKNIRPLPDKFSGLQNIEMRYRQRYID
LVMNPEVMDTMKKRFEIIRYFRTYLEKKGFLEVETPMLHPTLGGANARPFITHHNALDMDMYLRIAPELYLKRLLVGGFE
KVFEINRNFRNEGVSIKHNPEFTMMELYQAYADFNDMMDITEDLISSLTYHLYGTYEIPYEDKTVNLAKPWRRVTMKEIV
REHTGFVMDENTTDESAIEFAKGLGIHLDKDKTYTKFGILNLLFEEKVEHTIVNPTFVTDYPKEISPLSKNSKGESDWVD
RFELFITGREYGNAYSELNDPKDQKERFEEQVRAKENGDDEASEMDLDYIRALEYGMPPAGGLGIGIDRLVMLLTNSSSI
RDVIMFPTLKKETHFE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 4e-112 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smon_1034 YP_003306376.1 lysyl-tRNA synthetase VFG1668 Protein 2e-112 49