Gene Information

Name : Sdel_0923 (Sdel_0923)
Accession : YP_003303988.1
Strain : Sulfurospirillum deleyianum DSM 6946
Genome accession: NC_013512
Putative virulence/resistance : Unknown
Product : IstB domain-containing protein ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 929426 - 930247 bp
Length : 822 bp
Strand : +
Note : PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: gme:Gmet_3281 transposase/IS protein

DNA sequence :
ATGGCATTAAATACACATATCGAAACGTTATGCAAAGAGCTTCAACTCTCAACCGTTAATGACGTTCATCATGAAATGGC
TAATCGTGCCGCAAAAGAGGGTTGGAAATATGGTGAATATCTTTATGAGATACTCAAACTCGAAGCAAACAATAGAGCTG
TACGCTCTCGTGCTACTTTGACAAAAATGGCAGGATTTCCAACCATTAAAACACTTGAACAGTTTGATTTTAATTTCACA
GTTGGTGTAAATAGAAGACAAATTGAGGAGCTCTCAACATTAGAGTTTATCAAGCGAAATGAAAATATCATCCTTCTTGG
ACACTCTGGTGTTGGGAAAACCCATCTGGCTATTGCACTGGCGTATCAAGCTGTTCAAAAACGTATTAAAGCAAGATTTA
TCACAGTAGCTGATCTTATTTTGCAGATGAGTAACGCAAAAAAAGAGAAACGCTATGATTCATTTATACGTCAAGCCATT
ATGGCACCAGCGTTATTAGTCATTGATGAGATTGGCTATTTCCCAATGAGCAAAGAAGATGCTCATCATTTCTTTCAAGT
GATCTCTAAACGCTATGAACGTGGTGCAACTATCGTTACATCCAATCTCGTCTTTAGTCAGTGGAGTGGCATCTTTGCCA
ATGATAAAGTGGTAACGACTGCCATTTTAGATAGATTATTACATCACTCCCATATTATCAATATTCTAGGAGATTCATTT
CGTTTAAAAGAGAAAAAAGATGAGGGAATCGTAGATTCAGATTTGTATAAGTTTAAAGCTAAAAATTCGGTGAAAGGAGA
AGAAATAACGCAAGGTGCTTAA

Protein sequence :
MALNTHIETLCKELQLSTVNDVHHEMANRAAKEGWKYGEYLYEILKLEANNRAVRSRATLTKMAGFPTIKTLEQFDFNFT
VGVNRRQIEELSTLEFIKRNENIILLGHSGVGKTHLAIALAYQAVQKRIKARFITVADLILQMSNAKKEKRYDSFIRQAI
MAPALLVIDEIGYFPMSKEDAHHFFQVISKRYERGATIVTSNLVFSQWSGIFANDKVVTTAILDRLLHHSHIINILGDSF
RLKEKKDEGIVDSDLYKFKAKNSVKGEEITQGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api84 CAF28558.1 putative transposase Not tested YAPI Protein 7e-65 48
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 9e-65 48
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 7e-65 48
unnamed CAA21402.1 - Not tested HPI Protein 9e-65 48
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 7e-65 48
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 7e-65 48
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 7e-65 48
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 7e-65 48
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 1e-64 48
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 9e-65 48
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 9e-65 48
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 5e-64 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sdel_0923 YP_003303988.1 IstB domain-containing protein ATP-binding protein VFG1606 Protein 4e-65 48
Sdel_0923 YP_003303988.1 IstB domain-containing protein ATP-binding protein VFG1515 Protein 4e-65 48
Sdel_0923 YP_003303988.1 IstB domain-containing protein ATP-binding protein VFG1627 Protein 4e-65 48
Sdel_0923 YP_003303988.1 IstB domain-containing protein ATP-binding protein VFG1663 Protein 3e-64 47