Gene Information

Name : Sdel_0780 (Sdel_0780)
Accession : YP_003303848.1
Strain : Sulfurospirillum deleyianum DSM 6946
Genome accession: NC_013512
Putative virulence/resistance : Unknown
Product : integrase catalytic protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4584
EC number : -
Position : 776549 - 777847 bp
Length : 1299 bp
Strand : -
Note : PFAM: Integrase catalytic region; KEGG: maq:Maqu_1328 integrase catalytic subunit

DNA sequence :
ATGAAAAGGGTATCCATGAGAAAAATCAGTGAGGTGTTACGGCTTCATTTTAAGTTAGGTTTGTCGCTAAGGCAAAGTGC
AAATGCCACAGGGACATCAAGAGGAAGTGTGAGTAATTATTGCACACGATTTAAAGAGTTAGCTGTCGATATTGATCGTT
TCTTGAGCCTGAATGAAATGATGCAAGAGCAGTTGTTTTACCCAGAGTGTGGATGTGGGATTACGCCACAGGCGTCTAAA
GTCATGCCTGATTACATCACCATCCATCATGAACTAAAGAAAAAGCAACAAAGTAAAGTAACCTTAGCGTTGTTGCACGA
AGAGTATAAAGAAGCCCATCCCACTAATGCGTATAGCTACACGCAATTTCGTGAACACTACGTGCGGTTTTTAAACCAAA
TCAACCCATCCATGAGACAAGTGCACATTGCTGGTGAAAAAGTGTTTGTTGATTACAGTGGATTAACCATTCCCATCGTG
AATCAAAAGACAGGTGAGGTCTATAAAGCCCAAATCTTTGTAGCGGTTTTAGGAGCAAGTGGGTATACCTTTGTGCATGC
CTCCTATTCTCAGAAACAACGAGATTTTATCCTCTCCCATGTATTAGCCTATGACTTTTTTGGAGGTACACCTAAGATTG
TAGTGCCTGATAATCTTAAAAGTGCTGTCATCAAACATTCTAAAAAAGAGGGAGTTGTTATTAATGAAAGCTATGCAGCA
CTGGCCAGACATTACACTATGGCAGTAACACCAGCACGTCCTTATAAGCCCAAAGATAAAGCAAAAGTAGAACTTGGCGT
CAAAGGAATACAGCGGTGGATACTAGCAAGGCTAAGGCATCACACCTTTTTTAGTGTGGATGAACTCAATGCAGCACTCT
CAAATCTGCTTGATCTTTACAATCATAAAATTATTAAACGCATCGCTAAAAGCAGGACGGAACTTTTTAAAGAACTAGAT
CAGCCATTTTTACAAGCACTACCACTGCAGCGGTATCTGTATAAAGAATTTAAAGAAGCAACTGTAGCACAAAATTACCA
TATCTTTTTAGAAGGATGTGAATACTCTGTGCCCTATCAATACCTTGGATTAAGAGTACAAGTATGGCACTCAAGCCATA
GTGTTGATATTCATTATAAAGGGACAAAGATAGCCATTCATCCAAAACTGCACTTTGTAGGACAAGTATCAACTCTCCAT
GAGCATATGCCCTCCCACCATCAGTACCAGAGTGAAAAAACAAATCCAGGACGATTCTTGAATTGGGCCAATACGATTGG
TGCCCATACCCTCTCCTAG

Protein sequence :
MKRVSMRKISEVLRLHFKLGLSLRQSANATGTSRGSVSNYCTRFKELAVDIDRFLSLNEMMQEQLFYPECGCGITPQASK
VMPDYITIHHELKKKQQSKVTLALLHEEYKEAHPTNAYSYTQFREHYVRFLNQINPSMRQVHIAGEKVFVDYSGLTIPIV
NQKTGEVYKAQIFVAVLGASGYTFVHASYSQKQRDFILSHVLAYDFFGGTPKIVVPDNLKSAVIKHSKKEGVVINESYAA
LARHYTMAVTPARPYKPKDKAKVELGVKGIQRWILARLRHHTFFSVDELNAALSNLLDLYNHKIIKRIAKSRTELFKELD
QPFLQALPLQRYLYKEFKEATVAQNYHIFLEGCEYSVPYQYLGLRVQVWHSSHSVDIHYKGTKIAIHPKLHFVGQVSTLH
EHMPSHHQYQSEKTNPGRFLNWANTIGAHTLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0005c ACA01822.1 IstA Not tested VPI-2 Protein 5e-72 44
APECO1_3528 YP_854247.1 transposase for ISEc12 Not tested PAI I APEC-O1 Protein 7e-73 42
unnamed CAC39294.1 hypothetical protein Not tested LPA Protein 1e-72 42
ORF_6 AAZ04417.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 5e-73 42