Gene Information

Name : Sdel_0064 (Sdel_0064)
Accession : YP_003303137.1
Strain : Sulfurospirillum deleyianum DSM 6946
Genome accession: NC_013512
Putative virulence/resistance : Virulence
Product : KpsF/GutQ family protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : 5.3.1.13
Position : 63242 - 64207 bp
Length : 966 bp
Strand : +
Note : KEGG: nis:NIS_0063 arabinose-5-phosphate isomerase; TIGRFAM: KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein; SMART: CBS domain containing protein

DNA sequence :
ATGGAAGATTTTAAAGCAATCGCTAGAGAGGTTTTAGAACTAGAGGCGCAGGAGCTATTAAACGCTGCACGCTGTATTGG
CGAAGAGATGAGCGAGGCAACCCATTTGGTTGCCAATCTTAAGGGCAAGTTGATTGTAACAGGAGTAGGCAAAAGTGGGC
TAATTGGTGCGAAGATTGCTGCGACACTTGCCAGTACAGGAACAAGCAGTTTCTTTTTACACCCCACTGAAGCACTCCAT
GGTGATTTGGGAATGATTGGTAAAGAAGACGCTGTGTTAGCGATTAGTTACAGTGGTGAGAGTGAAGAGTTGATTAAAAT
CTTGCCACATATCAAGCGATTTAATATTCCTCTTATTGGTATGGCACGTACCAAAGAGTCTTCATTGGGGCGTTACAGCG
ATATTTTTATCCCTTTACATGTAAAGAAAGAGGCGTGTCCTTTGGATGCTGCTCCAACCTCGTCTACAACGCTCACATTA
GCCCTTGGTGATGCGTTAGCTGTTTGTCTTATGAAGAAAAAAGATTTTCAAAAAGAGGATTTTGCTTCATTTCATCCAGG
TGGAAGCTTAGGAAAACGTCTTTTTGTTAAAGTGCAAGATTTGATGCTGAAAGAAAACTTGCCTATTGTCCAAAAAGAGA
CAAAACTTAAGGATGCTATTCTTAAAATGAGTGAAGGACGTTTGGGTAATGTACTTATTACGGATAAAAACAACGTTTTG
TTAGCAGTATTAAGTGATGGCGATTTACGTAGAGCTTTAATGCGGGATGATTTTAGTATGGATGCTAGTGCCTATGAATA
TGCAAGTAAAAATCCAAAAAGGTTAGAGGATGAGACGCTTTTAGCCAGTGATGCCTTAGCGTTTATTGAAAAACATAAAA
TACAACTTTTAGCGATTACCGATAACGTAGGGATGCTCAAAGGTGTATTACATATCCACCATTTAGTGGAAGCAGGAATA
AAATAG

Protein sequence :
MEDFKAIAREVLELEAQELLNAARCIGEEMSEATHLVANLKGKLIVTGVGKSGLIGAKIAATLASTGTSSFFLHPTEALH
GDLGMIGKEDAVLAISYSGESEELIKILPHIKRFNIPLIGMARTKESSLGRYSDIFIPLHVKKEACPLDAAPTSSTTLTL
ALGDALAVCLMKKKDFQKEDFASFHPGGSLGKRLFVKVQDLMLKENLPIVQKETKLKDAILKMSEGRLGNVLITDKNNVL
LAVLSDGDLRRALMRDDFSMDASAYEYASKNPKRLEDETLLASDALAFIEKHKIQLLAITDNVGMLKGVLHIHHLVEAGI
K

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 1e-43 42
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 5e-44 41
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 6e-44 41