Gene Information

Name : Sdel_0312 (Sdel_0312)
Accession : YP_003303384.1
Strain : Sulfurospirillum deleyianum DSM 6946
Genome accession: NC_013512
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 295908 - 297404 bp
Length : 1497 bp
Strand : +
Note : PFAM: aldehyde dehydrogenase; KEGG: abu:Abu_0378 aldehyde dehydrogenase

DNA sequence :
ATGGTGTACAGTAAACCCGTCTATCAATCACAGTATGAGAATTTTATTGGGGGTGAGTGGATTGCTCCTATCAATGGTGA
GTATTTTGACAATCTTTCTCCTGTCGATGGAGAACTTTTAACGAAGATTCCTCGCTCAAGTACGGCCGATGTTGATGCTG
CCGTGGCAGCCGCAAAGAAGGCATTTGAGAGCTATAAACATTTTTCAGTCATTCAAAGAAGTGACATGCTCAATAAGATT
GCCGATAAAATAGAGGCAAATTTAGAGTTTTTAGCGATTTCTGAAACCTTAGATAATGGAAAGGCTGTTCGTGAAACTTT
AGCAGCAGATTTGCCTTTGGTGGTCGATCATTTTCGCTACTTTGCCTCAGTGATTCGTAGTGAAGCAGGAAGCGTGGCAG
ATTTGGATGAAAATACCATCTCACAAGAGGTTTATGAGCCACTGGGTGTTGTTGCGCAAATTATTCCGTGGAATTTTCCA
CTTTTAATGGCGGCATGGAAGATTGCTCCAGCTTTGGCTGCTGGAAACTGCGTGGTGATTAAACCTGCGAGTGCGACACC
TTTATCTATTTTACTTTTGATGGAGACGATTCAAGAGGTCTTGCCCAAAGGGGTGATCAATGTCATCAACGGTGCAGGTG
GAAAAATCGGTAAACATCTCTCCACCCACCCTGACATTAAAAAAGTAGGCTTTACAGGAGAGACAACCACGGGTCAGCTG
ATTATGCAGTATGCTACTGAAAATATCATTCCTTCAACCCTTGAGTTAGGAGGTAAATCACCCAATATTTTCTTTCCCTC
TGTGATGGCACACGATGATGACTTTTTGGATAAAGCGATTGAAGGACTTGTTTTATTTGCGTTTAACAGCGGCGAAGTGT
GCACATGCCCATCACGTGCACTGATACATGAGTCTATTTATGAGCCTTTTATGAAACGGGTTTTGGAGAGAGTTAAAGCG
ATTAGTCAAGAGAATCCTTTGGATGCAACCACAAGAATGGGGGCACAAGCCTCACTTAATCAAAAAGAGAAAATTTTGGA
GTACATTCGCATTGGAAAAGAAGAGGGGGCGCAGTGTTTAATCGGTGGTGAAGCCTATGAAAACAAAACTTATCCCAAAG
GAAATTACATTCAGCCCACCATCTTTAAAGGGCACAATAAAATGCGCATTTTCCAAGAAGAGATTTTTGGACCAGTGCTT
TGTGTTACCACATTTAAAGATGAGGCAGAAGCTCTCTCTATTGCCAATGACACCATTTATGGTTTAGGCTCAGGCGTTTG
GTCTAGGGATATGCATGAAATCCACCGTATGTCACGTGGCATTGAAGCGGGTCGTGTGTGGGTGAATTGCTATCATCTCT
ATCCTTCTCATGCCTCGTTTGGAGGGTATAAAAAATCAGGTATTGGGCGAGAAACCCATATGATGATGCTCAATGCGTAT
CGTCACACTAAAAATATCTTAACCTCTTTTACCCAAAAACCTTTAGGATTTTTTTAA

Protein sequence :
MVYSKPVYQSQYENFIGGEWIAPINGEYFDNLSPVDGELLTKIPRSSTADVDAAVAAAKKAFESYKHFSVIQRSDMLNKI
ADKIEANLEFLAISETLDNGKAVRETLAADLPLVVDHFRYFASVIRSEAGSVADLDENTISQEVYEPLGVVAQIIPWNFP
LLMAAWKIAPALAAGNCVVIKPASATPLSILLLMETIQEVLPKGVINVINGAGGKIGKHLSTHPDIKKVGFTGETTTGQL
IMQYATENIIPSTLELGGKSPNIFFPSVMAHDDDFLDKAIEGLVLFAFNSGEVCTCPSRALIHESIYEPFMKRVLERVKA
ISQENPLDATTRMGAQASLNQKEKILEYIRIGKEEGAQCLIGGEAYENKTYPKGNYIQPTIFKGHNKMRIFQEEIFGPVL
CVTTFKDEAEALSIANDTIYGLGSGVWSRDMHEIHRMSRGIEAGRVWVNCYHLYPSHASFGGYKKSGIGRETHMMMLNAY
RHTKNILTSFTQKPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-136 60
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 4e-142 59
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 4e-142 59
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 4e-142 59
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-141 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sdel_0312 YP_003303384.1 aldehyde dehydrogenase VFG0082 Protein 8e-137 60