Gene Information

Name : Sdel_2155 (Sdel_2155)
Accession : YP_003305202.1
Strain : Sulfurospirillum deleyianum DSM 6946
Genome accession: NC_013512
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.14
Position : 2162501 - 2163805 bp
Length : 1305 bp
Strand : -
Note : KEGG: ccv:CCV52592_1495 flagellum-specific ATP synthase; TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; SMART: ATPase AAA

DNA sequence :
ATGCCACTTCAACGCCTCAGACATAAACTTCAAGAAAAAAGCCTTTCTCCAATGTTTGGTACGATTACCAAAATTAGTTC
TACCACCATTGAGGCGTGTGGTTTAAGACCTAGCATTGGAGATATTGTTAATATCGTTTCCTTGGACAGTGATAAGAATG
AGTTAGGCATGGTCACCGAAGTGGATCGCAATGCCTTCTTTATCTCCCCGTTTGGATTTATTGAGGGGTTTAAGATTGGA
GATAAAGTTTTTATCAGTGAACAAGGAATGATGATTCCTGTGGGCGAAGAGTTATTAGGACGGGTGGTTGATCCGTTTAT
CCGCCCAAAAGATGGCAAAGGAGCGATAGGCGCACGCTCGTCCGCATCCATTATGAAAGCACCCTTAGACCCAATGAAAA
GAGGATTGATTAACGAGCCATTTTGTGTTGGAGTCAAGACGATTGATGGGCTTTTAACCTGTGGAAAAGGTCAAAAAATG
GGCATTTTTGCAGGGAGTGGTGTGGATAAATCAACACTGATGGGGATGATTGTAAGAGGCTCTGAAGCGCCCATTAAAGT
GGTGGCTTTAATTGGTGAACGTGGGCGTGAGGTGCCTGAGTTTATTGAGAAAAACTTGGGTGGCAATCTTGAAAATACGG
TCATCATTGTAGCGACCAGCGATGATTCCCCTCTCATGCGAAAGTATGGTGCTTTTAGTGCGATGAGTGTGGCAGAATAT
TTTAAAAATCAAGGAAGAGATGTGCTCTTTATGATGGATTCAGTGACCCGTTTTGCCATGGCGCAGCGGGAGATTGGTTT
AGCATTGGGTGAGCCTCCAACTTCTAAAGGGTATCCGCCTTCGGTGTTAGCCCTTTTGCCACAACTGATGGAACGTGCGG
GAAAAGAAGAAGGTAAAGGTTCCATTACCGCTTTTTTTACCGTTTTGGTTGAGGGTGATGATTTAAGTGATCCTATTGCG
GATCAGTCTCGTAGTATTCTTGATGGGCACATTGTGTTAAGTAGGGAATTAACGGATTATGGGATTTATCCGCCGATTAA
TATTCAAAACAGTGCTTCAAGGGTCATGGGGGATGTGATAGAAACAGAGCACAAAAAAGCAGCGATGCGGTTTAAGCGTT
TAAATTCGATTTTAAAAGAGAATGAAGTGTTAATTCGCATTGGCGCATACGAGAAGGGTAACGATAAAGAGCTGGATTTA
GCGATTAGTAAGAAAGAAAAAATGAACAGTTTTCTACAGCAAGCTCCTGAGGAAGTTGTGCCGTTTGAAACAACCGTAAG
TGAGTTAAAACAAATTATTGCCTAA

Protein sequence :
MPLQRLRHKLQEKSLSPMFGTITKISSTTIEACGLRPSIGDIVNIVSLDSDKNELGMVTEVDRNAFFISPFGFIEGFKIG
DKVFISEQGMMIPVGEELLGRVVDPFIRPKDGKGAIGARSSASIMKAPLDPMKRGLINEPFCVGVKTIDGLLTCGKGQKM
GIFAGSGVDKSTLMGMIVRGSEAPIKVVALIGERGREVPEFIEKNLGGNLENTVIIVATSDDSPLMRKYGAFSAMSVAEY
FKNQGRDVLFMMDSVTRFAMAQREIGLALGEPPTSKGYPPSVLALLPQLMERAGKEEGKGSITAFFTVLVEGDDLSDPIA
DQSRSILDGHIVLSRELTDYGIYPPINIQNSASRVMGDVIETEHKKAAMRFKRLNSILKENEVLIRIGAYEKGNDKELDL
AISKKEKMNSFLQQAPEEVVPFETTVSELKQIIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escN AAL57542.1 EscN Virulence LEE Protein 3e-82 47
escN CAI43874.1 EscN protein Virulence LEE Protein 1e-82 47
escN CAC81862.1 EscN protein Virulence LEE II Protein 1e-82 47
escN NP_290268.1 hypothetical protein Virulence LEE Protein 5e-82 47
ECs4568 NP_312595.1 EscN Virulence LEE Protein 5e-82 47
unnamed AAL06369.1 EscN Virulence LEE Protein 9e-83 47
escN YP_003236088.1 translocator EscN Virulence LEE Protein 2e-82 47
escN AAC31513.1 L0034 Virulence LEE Protein 3e-82 47
escN YP_003223475.1 translocator EscN Virulence LEE Protein 2e-82 47
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 3e-82 47
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 1e-82 47
escN AAK26715.1 EscN Virulence LEE Protein 3e-82 47
escN AAC38383.1 EscN Virulence LEE Protein 7e-82 46
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 6e-77 46
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 6e-77 46
lscN AAO18044.1 LscN Virulence TTSS locus Protein 1e-82 45
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 3e-86 44
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-85 44
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-84 44
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-85 44
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 3e-84 44
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 1e-85 44
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 1e-85 44
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-83 43
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-83 43
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-71 42
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 4e-72 42
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 6e-72 42
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-72 42
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 2e-71 42
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 1e-58 42
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 1e-62 42
invC AAS66861.1 InvC Not tested SSR-2 Protein 1e-60 42
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 5e-61 41
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 5e-61 41
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 4e-61 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sdel_2155 YP_003305202.1 flagellar protein export ATPase FliI VFG0048 Protein 9e-84 47
Sdel_2155 YP_003305202.1 flagellar protein export ATPase FliI VFG0812 Protein 2e-82 47
Sdel_2155 YP_003305202.1 flagellar protein export ATPase FliI VFG2144 Protein 2e-80 47
Sdel_2155 YP_003305202.1 flagellar protein export ATPase FliI VFG0390 Protein 2e-85 46
Sdel_2155 YP_003305202.1 flagellar protein export ATPase FliI VFG1254 Protein 1e-82 46
Sdel_2155 YP_003305202.1 flagellar protein export ATPase FliI VFG0730 Protein 4e-82 46
Sdel_2155 YP_003305202.1 flagellar protein export ATPase FliI VFG0192 Protein 2e-87 45
Sdel_2155 YP_003305202.1 flagellar protein export ATPase FliI VFG2499 Protein 7e-81 45
Sdel_2155 YP_003305202.1 flagellar protein export ATPase FliI VFG2331 Protein 2e-78 43
Sdel_2155 YP_003305202.1 flagellar protein export ATPase FliI VFG1008 Protein 2e-56 43
Sdel_2155 YP_003305202.1 flagellar protein export ATPase FliI VFG0515 Protein 2e-72 42
Sdel_2155 YP_003305202.1 flagellar protein export ATPase FliI VFG1778 Protein 3e-60 41