Gene Information

Name : Sdel_2019 (Sdel_2019)
Accession : YP_003305068.1
Strain : Sulfurospirillum deleyianum DSM 6946
Genome accession: NC_013512
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2033532 - 2034218 bp
Length : 687 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: tau:Tola_1246 ABC transporter

DNA sequence : 
ATGCTAAAAGCGATTGGGTTGCAAAAGGTTTATCATCAAGGAGAGGTGGCACAAGAGGTCATCAAAAACCTCTCTTTGGA
GATAAAAGGTGGAGAGTTTGTCTCGTTTGTGGGACCTAGTGGAAGCGGTAAAAGTACGGTGCTGAACATGTTAGGCTGTT
TGGATACGCCCACAAAGGGAGACATTTGGATTAACGACACCGCTATCACAACGATGAGTCGCACCCAAAGAGCTCATTTT
CGAGGAGAAAACATTGGGTTTATCTTTCAAAGTTTTAACCTTATTCCCGTGCTAAGCGTGTATGAAAATATCGAGTATCC
GCTTATTATGGTGCAAAATCTACCTGAACATGAACGCCAAAAGCGTATTATGCACCTGCTTGAAGCGGTGGGAATGGTAG
AGCACAAAGATAAAACCCCCGATAAAATCTCAGGTGGTCAGATGCAACGTGTCGCCATTGCCAGAGCTTTAGTGGGACAA
CCCAAAGTGGTCTTTGCCGATGAGCCTACCGCTAATTTAGACAGTAAAACTGCGCATATGATTCTTGATTTGATGAAAGA
GATTCAACGAAAATACCAGACTACCTTTGTGTTCGCCACCCATGATGAAAAAATTGTCGCCAATGTGGATAGACTTATTA
CGCTGATTGATGGTGAAATCGTAGAGGATAAAAGGATGCGTCCATGA

Protein sequence : 
MLKAIGLQKVYHQGEVAQEVIKNLSLEIKGGEFVSFVGPSGSGKSTVLNMLGCLDTPTKGDIWINDTAITTMSRTQRAHF
RGENIGFIFQSFNLIPVLSVYENIEYPLIMVQNLPEHERQKRIMHLLEAVGMVEHKDKTPDKISGGQMQRVAIARALVGQ
PKVVFADEPTANLDSKTAHMILDLMKEIQRKYQTTFVFATHDEKIVANVDRLITLIDGEIVEDKRMRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-34 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-34 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sdel_2019 YP_003305068.1 ABC transporter CP001581.1.gene798.p Protein 3e-40 44
Sdel_2019 YP_003305068.1 ABC transporter NC_008702.1.4606598. Protein 2e-33 42
Sdel_2019 YP_003305068.1 ABC transporter CP001581.1.gene598.p Protein 8e-38 41
Sdel_2019 YP_003305068.1 ABC transporter NC_012469.1.7686878. Protein 4e-37 41