Gene Information

Name : Sdel_1795 (Sdel_1795)
Accession : YP_003304845.1
Strain : Sulfurospirillum deleyianum DSM 6946
Genome accession: NC_013512
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 1822483 - 1823652 bp
Length : 1170 bp
Strand : -
Note : KEGG: abu:Abu_0659 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase

DNA sequence :
ATGAAAATAGCCATTGTTGGAACGGGGTATGTAGGACTTTCAAATGGGATTTTGTTAGCGCAACATCATGAGGTGGTGGC
TTTAGATATTGTGCCTGAAAAAATTGAGATGATTAATGCTAAAATCTCTCCTATCGAAGATAAAGAAATAGAAGACTATT
TAAAAACGAAATCATTAAATTTCAAAGGGACGTTAGATAAACATGAAGCGTATAGGGATGCTTCGTTTATTATCATAGCA
ACACCCACAGATTATGACCCTGAGAGCAACTATTTTAACACCAAATCCATCGAAAGTGTTGTGGCGGATATTCTTACATG
TAATCCTCAGGCGACCATGGTGATTAAATCAACCATTCCTGTGGGCTATACGAAAAGCTTGCGTGAGCGTTTTAATACCG
ATAATATCATCTTCTCTCCTGAATTTTTGCGTGAGGGCAAAGCGTTGTATGACAATTTGCATCCGAGTCGTATCATTGTT
GGTGAAAAGAGTGAGCGAGCTCAGGTGTTTGCGTCCTTGCTTGAAGAGGGTGCGATTAAGAAAGATATCCCAAAACTCTT
CACCGATAGCACGGAAGCCGAAGCGATTAAGCTTTTTGCCAATACCTACTTAGCAATGCGTGTGGCGTACTTTAACGAGT
TGGATTCGTATGCGGCGATACATGGCTTAAATACCAAACAGATTATTGAAGGGGTTGGGCTAGACCCACGCATTGGGCTT
CACTACAATAACCCTAGCTTTGGCTATGGTGGGTATTGTCTGCCTAAAGATACGAAACAACTTTTAGCCAATTATGCGAG
TGTTCCTTCTAATCTCATTGAAGCGATTGTGAAATCAAACTCAACACGAAAAGATTTTATTGCAGACTCCGTGCTGAGAA
AAAATCCAAAGCGTGTCGGCATTTATCGTTTGGTGATGAAAGAGGGCAGTGATAATTTTAGAAGCTCAGCCATTCAAGGC
ATTATGAAGCGTATAAAAGCTAAAGGCATTGAAGTGGTCGTGTATGAACCTAGCATTAAAGAAGAGAGCTTTTACCACTC
TTCTGTGATAAAAAATTTGGATGATTTTAAGTCATCGTGTGATGTCATAATTGCCAATCGGATGAGCCATGAACTTGAAG
ATGTAAAAGAGAAAGTTTATACCCGTGATATTTTCAACAGTGATAGTTAA

Protein sequence :
MKIAIVGTGYVGLSNGILLAQHHEVVALDIVPEKIEMINAKISPIEDKEIEDYLKTKSLNFKGTLDKHEAYRDASFIIIA
TPTDYDPESNYFNTKSIESVVADILTCNPQATMVIKSTIPVGYTKSLRERFNTDNIIFSPEFLREGKALYDNLHPSRIIV
GEKSERAQVFASLLEEGAIKKDIPKLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAAIHGLNTKQIIEGVGLDPRIGL
HYNNPSFGYGGYCLPKDTKQLLANYASVPSNLIEAIVKSNSTRKDFIADSVLRKNPKRVGIYRLVMKEGSDNFRSSAIQG
IMKRIKAKGIEVVVYEPSIKEESFYHSSVIKNLDDFKSSCDVIIANRMSHELEDVKEKVYTRDIFNSDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 2e-90 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sdel_1795 YP_003304845.1 nucleotide sugar dehydrogenase VFG0963 Protein 4e-105 55